RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
CDRT1-202ENST00000354433 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 NBPF15Q8N660 670 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 TTLL6Q8N841 843 aa15.07■□□□□ 0
CDRT1-202ENST00000354433 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 0
CDRT1-202ENST00000354433 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
CDRT1-202ENST00000354433 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
CDRT1-202ENST00000354433 HNRNPUQ00839 825 aaKnown RBP eCLIP15.06■□□□□ 0
CDRT1-202ENST00000354433 NBPF5PQ86XG9 351 aaPredicted RBP15.06■□□□□ 0
CDRT1-202ENST00000354433 RNF181Q9P0P0 153 aa15.06■□□□□ 0
CDRT1-202ENST00000354433 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
CDRT1-202ENST00000354433 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
CDRT1-202ENST00000354433 BRIP1Q9BX63 1249 aa15.05■□□□□ -0
CDRT1-202ENST00000354433 NIP7Q9Y221 180 aaKnown RBP eCLIP15.05■□□□□ -0
CDRT1-202ENST00000354433 FAM177BA6PVY3 158 aa15.04■□□□□ -0
CDRT1-202ENST00000354433 MYL6BP14649 208 aa15.04■□□□□ -0
CDRT1-202ENST00000354433 RASSF7Q02833 373 aa15.03■□□□□ -0
CDRT1-202ENST00000354433 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
CDRT1-202ENST00000354433 RUNDC1Q96C34 613 aa15.03■□□□□ -0
CDRT1-202ENST00000354433 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
CDRT1-202ENST00000354433 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
CDRT1-202ENST00000354433 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
CDRT1-202ENST00000354433 GTF2E1P29083 439 aaPredicted RBP15.02■□□□□ -0
CDRT1-202ENST00000354433 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
CDRT1-202ENST00000354433 DLEC1Q9Y238 1755 aa15.02□□□□□ -0.01
CDRT1-202ENST00000354433 EIF2S2P20042 333 aaKnown RBP15.02□□□□□ -0.01
CDRT1-202ENST00000354433 ADAMTS8Q9UP79 889 aa15.02□□□□□ -0.01
CDRT1-202ENST00000354433 HLFQ16534 295 aa15.01□□□□□ -0.01
CDRT1-202ENST00000354433 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
CDRT1-202ENST00000354433 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
CDRT1-202ENST00000354433 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
CDRT1-202ENST00000354433 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
CDRT1-202ENST00000354433 ZBTB3Q9H5J0 574 aa15□□□□□ -0.01
CDRT1-202ENST00000354433 MAP3K15Q6ZN16 1313 aa15□□□□□ -0.01
CDRT1-202ENST00000354433 RGL2O15211 777 aa14.99□□□□□ -0.01
CDRT1-202ENST00000354433 C21orf2O43822 256 aa14.99□□□□□ -0.01
CDRT1-202ENST00000354433 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
CDRT1-202ENST00000354433 CNKSR1Q969H4 720 aa14.99□□□□□ -0.01
CDRT1-202ENST00000354433 ERBB4Q15303 1308 aa14.99□□□□□ -0.01
CDRT1-202ENST00000354433 KDM2BQ8NHM5 1336 aa14.99□□□□□ -0.01
CDRT1-202ENST00000354433 KIF3CO14782 793 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 LMNB1P20700 586 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 BABAM1Q9NWV8 329 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 SRGNP10124 158 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 GPTP24298 496 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 STYK1Q6J9G0 422 aa14.98□□□□□ -0.01
CDRT1-202ENST00000354433 PRPF40BQ6NWY9 871 aaKnown RBP14.98□□□□□ -0.01
CDRT1-202ENST00000354433 C16orf71Q8IYS4 520 aaPredicted RBP14.98□□□□□ -0.01
CDRT1-202ENST00000354433 ERVV-1B6SEH8 477 aa14.97□□□□□ -0.01
CDRT1-202ENST00000354433 NFKBIEO00221 500 aa14.97□□□□□ -0.01
CDRT1-202ENST00000354433 ANXA1P04083 346 aa14.97□□□□□ -0.01
CDRT1-202ENST00000354433 NYXQ9GZU5 481 aa14.97□□□□□ -0.01
CDRT1-202ENST00000354433 TRIM35Q9UPQ4 493 aa14.97□□□□□ -0.01
CDRT1-202ENST00000354433 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
CDRT1-202ENST00000354433 NPR1P16066 1061 aa14.95□□□□□ -0.02
CDRT1-202ENST00000354433 SOGA3Q5TF21 947 aa14.95□□□□□ -0.02
CDRT1-202ENST00000354433 TAOK3Q9H2K8 898 aa14.95□□□□□ -0.02
CDRT1-202ENST00000354433 ZC3H4Q9UPT8 1303 aaKnown RBP14.95□□□□□ -0.02
CDRT1-202ENST00000354433 ABCC12Q96J65 1359 aa14.95□□□□□ -0.02
CDRT1-202ENST00000354433 AIMP1Q12904 312 aaKnown RBP14.94□□□□□ -0.02
CDRT1-202ENST00000354433 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
CDRT1-202ENST00000354433 CHL1O00533 1208 aa14.94□□□□□ -0.02
CDRT1-202ENST00000354433 APAF1O14727 1248 aa14.94□□□□□ -0.02
CDRT1-202ENST00000354433 TOMM70O94826 608 aa14.94□□□□□ -0.02
CDRT1-202ENST00000354433 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
CDRT1-202ENST00000354433 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
CDRT1-202ENST00000354433 HSPA6P17066 643 aa14.93□□□□□ -0.02
CDRT1-202ENST00000354433 PRELPP51888 382 aa14.93□□□□□ -0.02
CDRT1-202ENST00000354433 ERFEQ4G0M1 354 aa14.93□□□□□ -0.02
CDRT1-202ENST00000354433 HDGFL1Q5TGJ6 251 aa14.93□□□□□ -0.02
CDRT1-202ENST00000354433 GIGYF2Q6Y7W6 1299 aaKnown RBP14.93□□□□□ -0.02
CDRT1-202ENST00000354433 CACNA1SQ13698 1873 aa14.92□□□□□ -0.02
CDRT1-202ENST00000354433 TIAM2Q8IVF5 1701 aa14.92□□□□□ -0.02
CDRT1-202ENST00000354433 PDIA6Q15084 440 aa14.92□□□□□ -0.02
CDRT1-202ENST00000354433 CCDC93Q567U6 631 aa14.92□□□□□ -0.02
CDRT1-202ENST00000354433 RPGRQ92834 1020 aaKnown RBP14.92□□□□□ -0.02
CDRT1-202ENST00000354433 RRAGCQ9HB90 399 aa14.92□□□□□ -0.02
CDRT1-202ENST00000354433 IBTKQ9P2D0 1353 aaPredicted RBP14.92□□□□□ -0.02
CDRT1-202ENST00000354433 TNRC6CQ9HCJ0 1690 aaKnown RBP14.91□□□□□ -0.02
CDRT1-202ENST00000354433 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
CDRT1-202ENST00000354433 PARP10Q53GL7 1025 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 SUSD4Q5VX71 490 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 PPP1R42Q7Z4L9 355 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 XAGE3Q8WTP9 111 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 CFAP44Q96MT7 982 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 CHPF2Q9P2E5 772 aa14.91□□□□□ -0.02
CDRT1-202ENST00000354433 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
CDRT1-202ENST00000354433 ALDH1B1P30837 517 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 DPY19L2Q6NUT2 758 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 LRP10Q7Z4F1 713 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 ZNF34Q8IZ26 560 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 SBF1O95248 1867 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 NUP98P52948 1817 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 SLX4Q8IY92 1834 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 GLTPD2A6NH11 291 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms