RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 ZBTB3Q9H5J0 574 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 MAP7D1Q3KQU3 841 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
TRAF3-201ENST00000347662 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 CDKL5O76039 1030 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 NOS1P29475 1434 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 TRAK2O60296 914 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 MAP9Q49MG5 647 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 FBF1Q8TES7 1133 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-201ENST00000347662 C6orf229H3BNL8 230 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 MBD3O95983 291 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 NAIPQ13075 1403 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 ZNF622Q969S3 477 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRAF3-201ENST00000347662 KIF20AO95235 890 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 AMOTQ4VCS5 1084 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
TRAF3-201ENST00000347662 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
TRAF3-201ENST00000347662 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 ABCC5O15440 1437 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 TDRD12Q587J7 1177 aaKnown RBP13.62□□□□□ -0.23
TRAF3-201ENST00000347662 CEP135Q66GS9 1140 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 ACEP12821 1306 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
TRAF3-201ENST00000347662 ACTN2P35609 894 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAF3-201ENST00000347662 V9GYY5 206 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-201ENST00000347662 PRC1O43663 620 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 KIF5CO60282 957 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 SEPT6Q14141 434 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 CEP131Q9UPN4 1083 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 RFC4P35249 363 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 TERF1P54274 439 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 SAMM50Q9Y512 469 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
TRAF3-201ENST00000347662 CCDC63Q8NA47 563 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 SMC1BQ8NDV3 1235 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 RPUSD2Q8IZ73 545 aaKnown RBP13.61□□□□□ -0.23
TRAF3-201ENST00000347662 BIRC2Q13490 618 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 MICALCLQ6ZW33 695 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 SMTNL1A8MU46 457 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 SYCP3Q8IZU3 236 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
TRAF3-201ENST00000347662 WDR63Q8IWG1 891 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 BICD1Q96G01 975 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 F6X3S4 739 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 CCDC184Q52MB2 194 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
TRAF3-201ENST00000347662 NOL3O60936 208 aaKnown RBP13.6□□□□□ -0.23
TRAF3-201ENST00000347662 CCDC6Q16204 474 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 SPATA32Q96LK8 384 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 ATP2C2O75185 946 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 CAVIN4Q5BKX8 364 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 UBXN4Q92575 508 aa13.6□□□□□ -0.23
TRAF3-201ENST00000347662 CLGNO14967 610 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 TAF12Q16514 161 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 SNX16P57768 344 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 KRT85P78386 507 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
TRAF3-201ENST00000347662 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
TRAF3-201ENST00000347662 POLR3GO15318 223 aaPredicted RBP13.58□□□□□ -0.23
TRAF3-201ENST00000347662 DPH6Q7L8W6 267 aa13.58□□□□□ -0.23
TRAF3-201ENST00000347662 NUTM1Q86Y26 1132 aa13.58□□□□□ -0.23
TRAF3-201ENST00000347662 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.24
TRAF3-201ENST00000347662 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-201ENST00000347662 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 SEPT10Q9P0V9 454 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 MAATS1Q7Z4T9 603 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-201ENST00000347662 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 NUP88Q99567 741 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-201ENST00000347662 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 SPECC1LQ69YQ0 1117 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 ZNF287Q9HBT7 754 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 PAFAH1B1P43034 410 aa13.58□□□□□ -0.24
TRAF3-201ENST00000347662 KIF4BQ2VIQ3 1234 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
TRAF3-201ENST00000347662 FAM107BQ9H098 131 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAF3-201ENST00000347662 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
TRAF3-201ENST00000347662 FLIIQ13045 1269 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 IQCGQ9H095 443 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms