RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
COL12A1-202ENST00000345356 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
COL12A1-202ENST00000345356 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
COL12A1-202ENST00000345356 DAPK1P53355 1430 aa13.96□□□□□ -0.18
COL12A1-202ENST00000345356 OPA1O60313 960 aa13.96□□□□□ -0.18
COL12A1-202ENST00000345356 BOLA2Q9H3K6 86 aa13.96□□□□□ -0.18
COL12A1-202ENST00000345356 HYPKQ9NX55 129 aa13.96□□□□□ -0.18
COL12A1-202ENST00000345356 HDXQ7Z353 690 aa13.95□□□□□ -0.18
COL12A1-202ENST00000345356 NAA25Q14CX7 972 aa13.95□□□□□ -0.18
COL12A1-202ENST00000345356 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
COL12A1-202ENST00000345356 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
COL12A1-202ENST00000345356 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
COL12A1-202ENST00000345356 ZSCAN16Q9H4T2 348 aaPredicted RBP13.95□□□□□ -0.18
COL12A1-202ENST00000345356 CACNA2D4Q7Z3S7 1137 aa13.95□□□□□ -0.18
COL12A1-202ENST00000345356 CCDC57Q2TAC2 916 aa13.95□□□□□ -0.18
COL12A1-202ENST00000345356 RHOXF2BP0C7M4 288 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 ANAPC15P60006 121 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 RHOXF2Q9BQY4 288 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 CTAGE9A4FU28 777 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 F6X3S4 739 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
COL12A1-202ENST00000345356 CCDC114Q96M63 670 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 HSP90AA4PQ58FG1 418 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 EHBP1Q8NDI1 1231 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 NACAP1Q9BZK3 213 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
COL12A1-202ENST00000345356 POLR3DP05423 398 aaPredicted RBP13.93□□□□□ -0.18
COL12A1-202ENST00000345356 PIP4K2BP78356 416 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 SARNPP82979 210 aaKnown RBP13.93□□□□□ -0.18
COL12A1-202ENST00000345356 TNNQ9UQP3 1299 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 C9orf84Q5VXU9 1444 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 A0A1B0GUA9 196 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 ZEB2O60315 1214 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 DNAJC21Q5F1R6 531 aaKnown RBP13.93□□□□□ -0.18
COL12A1-202ENST00000345356 NUTM2GQ5VZR2 741 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 RSRC1Q96IZ7 334 aaKnown RBP13.93□□□□□ -0.18
COL12A1-202ENST00000345356 PRAM1Q96QH2 718 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 ESYT1Q9BSJ8 1104 aa13.93□□□□□ -0.18
COL12A1-202ENST00000345356 TDRD12Q587J7 1177 aaKnown RBP13.93□□□□□ -0.18
COL12A1-202ENST00000345356 LMOD1P29536 600 aaPredicted RBP13.92□□□□□ -0.18
COL12A1-202ENST00000345356 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 KARSQ15046 597 aaKnown RBP13.92□□□□□ -0.18
COL12A1-202ENST00000345356 FAM76AQ8TAV0 307 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 RLBP1P12271 317 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 CCDC102BQ68D86 513 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 PPFIA3O75145 1194 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL12A1-202ENST00000345356 PTPRGP23470 1445 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 TUBB4BP68371 445 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
COL12A1-202ENST00000345356 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
COL12A1-202ENST00000345356 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
COL12A1-202ENST00000345356 NLRP6P59044 892 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.91□□□□□ -0.18
COL12A1-202ENST00000345356 IFNKQ9P0W0 207 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 ZSCAN26Q16670 478 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 ZSCAN25Q6NSZ9 544 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
COL12A1-202ENST00000345356 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 OAS2P29728 719 aaKnown RBP13.91□□□□□ -0.18
COL12A1-202ENST00000345356 INTS4Q96HW7 963 aaKnown RBP13.91□□□□□ -0.18
COL12A1-202ENST00000345356 MYCBPQ99417 103 aaPredicted RBP13.91□□□□□ -0.18
COL12A1-202ENST00000345356 LMBRD1Q9NUN5 540 aa13.91□□□□□ -0.18
COL12A1-202ENST00000345356 SYKP43405 635 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 MCM10Q7L590 875 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 LZTFL1Q9NQ48 299 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-202ENST00000345356 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 FSD2A1L4K1 749 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 N4BP3O15049 544 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 MAP2K2P36507 400 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 AFAP1L1Q8TED9 768 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
COL12A1-202ENST00000345356 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
COL12A1-202ENST00000345356 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
COL12A1-202ENST00000345356 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-202ENST00000345356 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.19
COL12A1-202ENST00000345356 GSTTP1A0A1W2PQM5 241 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 INPP5BP32019 993 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 EVI5LQ96CN4 794 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 UTP14AQ9BVJ6 771 aaKnown RBP13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CDK19Q9BWU1 502 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 PDE1AP54750 535 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CCDC8Q9H0W5 538 aaPredicted RBP13.89□□□□□ -0.19
COL12A1-202ENST00000345356 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 TUBBP07437 444 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CLNS1AP54105 237 aaKnown RBP13.89□□□□□ -0.19
COL12A1-202ENST00000345356 ZNF569Q5MCW4 686 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 BANK1Q8NDB2 785 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CNNM1Q9NRU3 951 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CLGNO14967 610 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms