RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
TPM4-202ENST00000344824 DPEP1P16444 411 aa17.88■□□□□ 0.45
TPM4-202ENST00000344824 ZNF652Q9Y2D9 606 aa17.88■□□□□ 0.45
TPM4-202ENST00000344824 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
TPM4-202ENST00000344824 CHL1O00533 1208 aa17.87■□□□□ 0.45
TPM4-202ENST00000344824 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
TPM4-202ENST00000344824 ANKRD36CQ5JPF3 1778 aa17.87■□□□□ 0.45
TPM4-202ENST00000344824 ANXA1P04083 346 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 TGFB2P61812 414 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 KIF6Q6ZMV9 814 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 BCS1LQ9Y276 419 aa17.86■□□□□ 0.45
TPM4-202ENST00000344824 FAM177BA6PVY3 158 aa17.85■□□□□ 0.45
TPM4-202ENST00000344824 GRIN3BO60391 1043 aa17.85■□□□□ 0.45
TPM4-202ENST00000344824 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
TPM4-202ENST00000344824 CHRNA5P30532 468 aa17.85■□□□□ 0.45
TPM4-202ENST00000344824 GNAI1P63096 354 aa17.85■□□□□ 0.45
TPM4-202ENST00000344824 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
TPM4-202ENST00000344824 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
TPM4-202ENST00000344824 ZBTB3Q9H5J0 574 aa17.84■□□□□ 0.45
TPM4-202ENST00000344824 IFT57Q9NWB7 429 aa17.84■□□□□ 0.45
TPM4-202ENST00000344824 ERBB4Q15303 1308 aa17.84■□□□□ 0.45
TPM4-202ENST00000344824 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.45
TPM4-202ENST00000344824 CNBD1Q8NA66 436 aa17.83■□□□□ 0.45
TPM4-202ENST00000344824 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.45
TPM4-202ENST00000344824 HLFQ16534 295 aa17.82■□□□□ 0.44
TPM4-202ENST00000344824 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
TPM4-202ENST00000344824 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
TPM4-202ENST00000344824 PRR5LQ6MZQ0 368 aa17.82■□□□□ 0.44
TPM4-202ENST00000344824 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
TPM4-202ENST00000344824 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
TPM4-202ENST00000344824 ST5P78524 1137 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 AIMP1Q12904 312 aaKnown RBP17.81■□□□□ 0.44
TPM4-202ENST00000344824 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
TPM4-202ENST00000344824 MAP3K15Q6ZN16 1313 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 ELL2O00472 640 aaPredicted RBP17.81■□□□□ 0.44
TPM4-202ENST00000344824 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 DUSP27Q5VZP5 1158 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 CLEC4GQ6UXB4 293 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 TSR2Q969E8 191 aaKnown RBP17.81■□□□□ 0.44
TPM4-202ENST00000344824 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 CHPF2Q9P2E5 772 aa17.81■□□□□ 0.44
TPM4-202ENST00000344824 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
TPM4-202ENST00000344824 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
TPM4-202ENST00000344824 ARFGEF2Q9Y6D5 1785 aa17.8■□□□□ 0.44
TPM4-202ENST00000344824 TNRC6CQ9HCJ0 1690 aaKnown RBP17.79■□□□□ 0.44
TPM4-202ENST00000344824 GPTP24298 496 aa17.79■□□□□ 0.44
TPM4-202ENST00000344824 PDIA6Q15084 440 aa17.79■□□□□ 0.44
TPM4-202ENST00000344824 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
TPM4-202ENST00000344824 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
TPM4-202ENST00000344824 HOXB7P09629 217 aa17.78■□□□□ 0.44
TPM4-202ENST00000344824 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
TPM4-202ENST00000344824 XAGE3Q8WTP9 111 aa17.78■□□□□ 0.44
TPM4-202ENST00000344824 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
TPM4-202ENST00000344824 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
TPM4-202ENST00000344824 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
TPM4-202ENST00000344824 H0YIN7 160 aa17.77■□□□□ 0.44
TPM4-202ENST00000344824 KCNA3P22001 575 aa17.77■□□□□ 0.44
TPM4-202ENST00000344824 WDR63Q8IWG1 891 aa17.77■□□□□ 0.44
TPM4-202ENST00000344824 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■■□□□ 11.9
TPM4-202ENST00000344824 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■■□□□ 12.4
TPM4-202ENST00000344824 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
TPM4-202ENST00000344824 PDE6BP35913 854 aa17.76■□□□□ 0.43
TPM4-202ENST00000344824 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
TPM4-202ENST00000344824 COPS6Q7L5N1 327 aa17.76■□□□□ 0.43
TPM4-202ENST00000344824 BRIP1Q9BX63 1249 aa17.75■□□□□ 0.43
TPM4-202ENST00000344824 E9PSI1 815 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 RGL2O15211 777 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 TPTE2Q6XPS3 522 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 GIGYF2Q6Y7W6 1299 aaKnown RBP17.74■□□□□ 0.43
TPM4-202ENST00000344824 LRP10Q7Z4F1 713 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
TPM4-202ENST00000344824 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
TPM4-202ENST00000344824 SLX4Q8IY92 1834 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 SBF1O95248 1867 aa17.74■□□□□ 0.43
TPM4-202ENST00000344824 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
TPM4-202ENST00000344824 ABCC12Q96J65 1359 aa17.73■□□□□ 0.43
TPM4-202ENST00000344824 LAMB2P55268 1798 aa17.73■□□□□ 0.43
TPM4-202ENST00000344824 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 TTLL6Q8N841 843 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 IL16Q14005 1332 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
TPM4-202ENST00000344824 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
TPM4-202ENST00000344824 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
TPM4-202ENST00000344824 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
TPM4-202ENST00000344824 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
TPM4-202ENST00000344824 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
TPM4-202ENST00000344824 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
TPM4-202ENST00000344824 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
TPM4-202ENST00000344824 PDZRN3Q9UPQ7 1066 aa17.71■□□□□ 0.43
TPM4-202ENST00000344824 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms