RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 GLRX3O76003 335 aaKnown RBP23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 RUFY3Q7L099 469 aa23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 CCDC83Q8IWF9 413 aa23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 SUCLG2Q96I99 432 aa23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 JAKMIP1Q96N16 626 aaKnown RBP23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 BICC1Q9H694 974 aaKnown RBP23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 CNPY2Q9Y2B0 182 aa23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 HSP90AB4PQ58FF6 505 aa23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 KSR2Q6VAB6 950 aa23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 TLR7Q9NYK1 1049 aaKnown RBP23.06■■□□□ 1.28
LYSMD4-202ENST00000344791 ARHGEF25Q86VW2 580 aa23.05■■□□□ 1.28
LYSMD4-202ENST00000344791 ZSCAN30Q86W11 494 aa23.05■■□□□ 1.28
LYSMD4-202ENST00000344791 TCEANC2Q96MN5 208 aa23.05■■□□□ 1.28
LYSMD4-202ENST00000344791 CCDC9Q9Y3X0 531 aaKnown RBP23.05■■□□□ 1.28
LYSMD4-202ENST00000344791 FIBPO43427 364 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 MBD3O95983 291 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 HOXB7P09629 217 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 FAM227BQ96M60 508 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 ECHDC1Q9NTX5 307 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 COL9A3Q14050 684 aaPredicted RBP23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 AMOTQ4VCS5 1084 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 RIC3Q7Z5B4 369 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 BOLA2Q9H3K6 86 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 NLRP2Q9NX02 1062 aa23.04■■□□□ 1.28
LYSMD4-202ENST00000344791 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
LYSMD4-202ENST00000344791 CACNA1FO60840 1977 aa23.03■■□□□ 1.28
LYSMD4-202ENST00000344791 WDR33Q9C0J8 1336 aaKnown RBP23.03■■□□□ 1.28
LYSMD4-202ENST00000344791 NFAT5O94916 1531 aa23.03■■□□□ 1.28
LYSMD4-202ENST00000344791 SMC3Q9UQE7 1217 aa23.03■■□□□ 1.28
LYSMD4-202ENST00000344791 GRM8O00222 908 aa23.02■■□□□ 1.28
LYSMD4-202ENST00000344791 NECAB1Q8N987 351 aa23.02■■□□□ 1.28
LYSMD4-202ENST00000344791 EAF2Q96CJ1 260 aaPredicted RBP23.02■■□□□ 1.28
LYSMD4-202ENST00000344791 LIMCH1Q9UPQ0 1083 aa23.02■■□□□ 1.28
LYSMD4-202ENST00000344791 NDUFB9Q9Y6M9 179 aa23.02■■□□□ 1.28
LYSMD4-202ENST00000344791 SYT1P21579 422 aa23.01■■□□□ 1.27
LYSMD4-202ENST00000344791 TTC14Q96N46 770 aa23.01■■□□□ 1.27
LYSMD4-202ENST00000344791 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
LYSMD4-202ENST00000344791 G3BP1Q13283 466 aaKnown RBP eCLIP23.01■■□□□ 1.27
LYSMD4-202ENST00000344791 EDC3Q96F86 508 aaKnown RBP23.01■■□□□ 1.27
LYSMD4-202ENST00000344791 SASH1O94885 1247 aa23■■□□□ 1.27
LYSMD4-202ENST00000344791 KRT28Q7Z3Y7 464 aa23■■□□□ 1.27
LYSMD4-202ENST00000344791 NFATC2IPQ8NCF5 419 aa23■■□□□ 1.27
LYSMD4-202ENST00000344791 GPATCH3Q96I76 525 aa23■■□□□ 1.27
LYSMD4-202ENST00000344791 KAZALD1Q96I82 304 aa23■■□□□ 1.27
LYSMD4-202ENST00000344791 PDRG1Q9NUG6 133 aa22.99■■□□□ 1.27
LYSMD4-202ENST00000344791 TTC41PQ6P2S7 1318 aa22.99■■□□□ 1.27
LYSMD4-202ENST00000344791 VPS37CA5D8V6 355 aaPredicted RBP22.99■■□□□ 1.27
LYSMD4-202ENST00000344791 STX6O43752 255 aa22.99■■□□□ 1.27
LYSMD4-202ENST00000344791 CABLES1Q8TDN4 633 aa22.99■■□□□ 1.27
LYSMD4-202ENST00000344791 RUFY2Q8WXA3 655 aa22.99■■□□□ 1.27
LYSMD4-202ENST00000344791 TSPY26PQ9H489 355 aa22.98■■□□□ 1.27
LYSMD4-202ENST00000344791 GJB2P29033 226 aa22.98■■□□□ 1.27
LYSMD4-202ENST00000344791 NMIQ13287 307 aaPredicted RBP22.98■■□□□ 1.27
LYSMD4-202ENST00000344791 MYD88Q99836 296 aa22.98■■□□□ 1.27
LYSMD4-202ENST00000344791 CHMP3Q9Y3E7 222 aa22.98■■□□□ 1.27
LYSMD4-202ENST00000344791 TCHHQ07283 1943 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 ALDH1L1O75891 902 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 CSB-PGBD3P0DP91 1061 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 ZSCAN22P10073 491 aaPredicted RBP22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 LINS1Q8NG48 757 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 FSD1Q9BTV5 496 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 IGKV5-2P06315 115 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 XAGE3Q8WTP9 111 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 RAPGEF4Q8WZA2 1011 aa22.97■■□□□ 1.27
LYSMD4-202ENST00000344791 DDX58O95786 925 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 PLCB2Q00722 1185 aa22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 COPS6Q7L5N1 327 aa22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 PROSER2Q86WR7 435 aaPredicted RBP22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 RBM8AQ9Y5S9 174 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 PTMAP06454 111 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 TAF6LQ9Y6J9 622 aa22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 ADGRL3Q9HAR2 1447 aa22.96■■□□□ 1.27
LYSMD4-202ENST00000344791 CHGBP05060 677 aa22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 MTX1Q13505 466 aa22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 CHRNA2Q15822 529 aa22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 EPHA10Q5JZY3 1008 aa22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 ZNF790Q6PG37 636 aa22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 FERMT3Q86UX7 667 aa22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 SYAP1Q96A49 352 aaPredicted RBP22.95■■□□□ 1.27
LYSMD4-202ENST00000344791 DDX21Q9NR30 783 aaKnown RBP eCLIP22.95■■□□□ 1.26
LYSMD4-202ENST00000344791 CYP46A1Q9Y6A2 500 aa22.95■■□□□ 1.26
LYSMD4-202ENST00000344791 A0A0D9SFI3 127 aa22.95■■□□□ 1.26
LYSMD4-202ENST00000344791 DNM1Q05193 864 aaKnown RBP22.95■■□□□ 1.26
LYSMD4-202ENST00000344791 PDIA6Q15084 440 aa22.95■■□□□ 1.26
LYSMD4-202ENST00000344791 ERC1Q8IUD2 1116 aa22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 EVI5LQ96CN4 794 aa22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 MED1Q15648 1581 aaPredicted RBP22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 ATP5J2-PTCD1G3V325 749 aa22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 PTCD1O75127 700 aaKnown RBP22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 ZKSCAN1P17029 563 aaPredicted RBP22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 STK3Q13188 491 aa22.94■■□□□ 1.26
LYSMD4-202ENST00000344791 CCDC171Q6TFL3 1326 aa22.93■■□□□ 1.26
LYSMD4-202ENST00000344791 ME3Q16798 604 aa22.93■■□□□ 1.26
LYSMD4-202ENST00000344791 FAM173BQ6P4H8 233 aa22.93■■□□□ 1.26
LYSMD4-202ENST00000344791 PDLIM2Q96JY6 352 aa22.93■■□□□ 1.26
LYSMD4-202ENST00000344791 USP16Q9Y5T5 823 aa22.93■■□□□ 1.26
LYSMD4-202ENST00000344791 NEXNQ0ZGT2 675 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms