RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CATIPQ7Z7H3 387 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 TSPYL2Q9H2G4 693 aaPredicted RBP4.34□□□□□ -1.72
SYNE2-202ENST00000344113 ATP2B1P20020 1258 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC27Q2M243 656 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC110Q8TBZ0 833 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 KIF15Q9NS87 1388 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 CEP63Q96MT8 703 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 DNAI2Q9GZS0 605 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 MKL2Q9ULH7 1088 aa4.34□□□□□ -1.72
SYNE2-202ENST00000344113 FAM177BA6PVY3 158 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 ZBTB22O15209 634 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 LACTBP83111 547 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-202ENST00000344113 ATP11AP98196 1134 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 PLCB4Q15147 1175 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 SOGA3Q5TF21 947 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 OPA1O60313 960 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 E2F6O75461 281 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 ERO1AQ96HE7 468 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TRIM7Q9C029 511 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 IRX5P78411 483 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC181Q5TID7 509 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CEP128Q6ZU80 1094 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 EPS15P42566 896 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 KRT72Q14CN4 511 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 C11orf91Q3C1V1 193 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 NBPF8Q3BBV2 869 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CXorf56Q9H5V9 222 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CACNA2D3Q8IZS8 1091 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 ERICH4A6NGS2 130 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 NONOQ15233 471 aaKnown RBP eCLIP4.33□□□□□ -1.72
SYNE2-202ENST00000344113 RAB3IL1Q8TBN0 382 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 LIN7AO14910 233 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-202ENST00000344113 RAD54L2Q9Y4B4 1467 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 NAA15Q9BXJ9 866 aaKnown RBP4.33□□□□□ -1.72
SYNE2-202ENST00000344113 RAD21O60216 631 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 NSRP1Q9H0G5 558 aaKnown RBP4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CPP00450 1065 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 GBP1P32455 592 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 SKIDA1Q1XH10 827 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TBC1D12O60347 775 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CROCCP2Q86T23 111 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TSPY2A6NKD2 308 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TSPY3P0CV98 308 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TSPY8P0CW00 308 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TSPY1Q01534 308 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 HSP90AA5PQ58FG0 334 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 TOMM22Q9NS69 142 aa4.33□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC162PA2VCL2 907 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 LRRFIP1Q32MZ4 808 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 TRIM21P19474 475 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 RUBCNQ92622 972 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC186Q7Z3E2 898 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ANKRD13BQ86YJ7 626 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 DZIP1LQ8IYY4 767 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ANKRD33BA6NCL7 494 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 TUBA3CQ13748 450 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 RPAP1Q9BWH6 1393 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ANKRD7Q92527 254 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 STMN2Q93045 179 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 DSEQ9UL01 958 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 MSL3P1P0C860 447 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ARHGAP18Q8N392 663 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 TROVE2P10155 538 aaKnown RBP eCLIP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 GCKP35557 465 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC68Q9H2F9 335 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 SF3A1Q15459 793 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 MIER3Q7Z3K6 550 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 SPDL1Q96EA4 605 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 BAZ1AQ9NRL2 1556 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 URI1O94763 535 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 CTNNBL1Q8WYA6 563 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 TEX11Q8IYF3 940 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ZNF148Q9UQR1 794 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 DHX16O60231 1041 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 STK3Q13188 491 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 DIABLOQ9NR28 239 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 MSL1Q68DK7 614 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 DRC1Q96MC2 740 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 RSPH14Q9UHP6 348 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 SMC3Q9UQE7 1217 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 GFAPP14136 432 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 MYOCDQ8IZQ8 938 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 CIDEBQ9UHD4 219 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 FAN1Q9Y2M0 1017 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 TSC1Q92574 1164 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 CDCA5Q96FF9 252 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 DDX27Q96GQ7 796 aaKnown RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 ATN1P54259 1190 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-202ENST00000344113 KIF4BQ2VIQ3 1234 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 MIS12Q9H081 205 aa4.32□□□□□ -1.72
SYNE2-202ENST00000344113 CECR2Q9BXF3 1484 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 PCYT1AP49585 367 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 NFE2L2Q16236 605 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 PIP4K2BP78356 416 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MAP3K9P80192 1104 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 SEPT10Q9P0V9 454 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 SETD5Q9C0A6 1442 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 SH3BP5O60239 455 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 LONRF3Q496Y0 759 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms