RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
CARMIL3-201ENST00000342740 FAM13BQ9NYF5 915 aa18.36■□□□□ 0.53
CARMIL3-201ENST00000342740 SAMD9LQ8IVG5 1584 aa18.36■□□□□ 0.53
CARMIL3-201ENST00000342740 RNMTO43148 476 aaKnown RBP18.36■□□□□ 0.53
CARMIL3-201ENST00000342740 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
CARMIL3-201ENST00000342740 MPNDQ8N594 471 aa18.36■□□□□ 0.53
CARMIL3-201ENST00000342740 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 CHL1O00533 1208 aa18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 PA2G4Q9UQ80 394 aaKnown RBP18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 G2E3Q7L622 706 aa18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 SYCE3A1L190 88 aa18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 CCDC70Q6NSX1 233 aa18.35■□□□□ 0.53
CARMIL3-201ENST00000342740 SCAND2PQ9GZW5 306 aaPredicted RBP18.34■□□□□ 0.53
CARMIL3-201ENST00000342740 USP5P45974 858 aa18.34■□□□□ 0.53
CARMIL3-201ENST00000342740 FILIP1LQ4L180 1135 aa18.34■□□□□ 0.53
CARMIL3-201ENST00000342740 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
CARMIL3-201ENST00000342740 DZIP1Q86YF9 867 aaKnown RBP18.34■□□□□ 0.53
CARMIL3-201ENST00000342740 TOM1O60784 492 aa18.33■□□□□ 0.53
CARMIL3-201ENST00000342740 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
CARMIL3-201ENST00000342740 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
CARMIL3-201ENST00000342740 ACSBG1Q96GR2 724 aa18.33■□□□□ 0.52
CARMIL3-201ENST00000342740 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.52
CARMIL3-201ENST00000342740 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
CARMIL3-201ENST00000342740 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
CARMIL3-201ENST00000342740 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 DDB1Q16531 1140 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 C8orf76Q96K31 380 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 SERPINC1P01008 464 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 ZFYVE16Q7Z3T8 1539 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 OFD1O75665 1012 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
CARMIL3-201ENST00000342740 RANBP6O60518 1105 aaKnown RBP18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 POLR3DP05423 398 aaPredicted RBP18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 HAND2P61296 217 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 INSRP06213 1382 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 EPS15P42566 896 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 CEP57L1Q8IYX8 460 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 ZNF287Q9HBT7 754 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 IL15P40933 162 aaPredicted RBP18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 MNS1Q8NEH6 495 aa18.31■□□□□ 0.52
CARMIL3-201ENST00000342740 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 UBAP1LF5GYI3 381 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 IFIT3O14879 490 aaKnown RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 IQCA1Q86XH1 822 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 RPGRQ92834 1020 aaKnown RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 KRT18P05783 430 aaKnown RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 NAP1L1P55209 391 aaKnown RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 PLEKHM2Q8IWE5 1019 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
CARMIL3-201ENST00000342740 CAMK4Q16566 473 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 ATP2B3Q16720 1220 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 TMX3Q96JJ7 454 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 AK7Q96M32 723 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 STX6O43752 255 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 GDPD2Q9HCC8 539 aa18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 MAGEC2Q9UBF1 373 aaPredicted RBP18.29■□□□□ 0.52
CARMIL3-201ENST00000342740 GJB2P29033 226 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 DACH1Q9UI36 760 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 CTCFLQ8NI51 663 aaPredicted RBP18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 UQCRFS1P1P0C7P4 283 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
CARMIL3-201ENST00000342740 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.52
CARMIL3-201ENST00000342740 BAG4O95429 457 aaKnown RBP18.27■□□□□ 0.52
CARMIL3-201ENST00000342740 ANAPC15P60006 121 aa18.27■□□□□ 0.52
CARMIL3-201ENST00000342740 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
CARMIL3-201ENST00000342740 MLH3Q9UHC1 1453 aa18.27■□□□□ 0.52
CARMIL3-201ENST00000342740 C6orf229H3BNL8 230 aa18.27■□□□□ 0.51
CARMIL3-201ENST00000342740 RFC4P35249 363 aa18.27■□□□□ 0.51
CARMIL3-201ENST00000342740 GPS2Q13227 327 aa18.27■□□□□ 0.51
CARMIL3-201ENST00000342740 NBPF5PQ86XG9 351 aaPredicted RBP18.27■□□□□ 0.51
CARMIL3-201ENST00000342740 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.51
CARMIL3-201ENST00000342740 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.51
CARMIL3-201ENST00000342740 TCEANC2Q96MN5 208 aa18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 USP16Q9Y5T5 823 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms