RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 KIF6Q6ZMV9 814 aa28.21■■■□□ 2.11
RBM38-201ENST00000342690 COPS6Q7L5N1 327 aa28.21■■■□□ 2.11
RBM38-201ENST00000342690 HYPKQ9NX55 129 aa28.21■■■□□ 2.11
RBM38-201ENST00000342690 MAP3K15Q6ZN16 1313 aa28.2■■■□□ 2.11
RBM38-201ENST00000342690 MMP10P09238 476 aa28.2■■■□□ 2.1
RBM38-201ENST00000342690 AIMP1Q12904 312 aaKnown RBP28.2■■■□□ 2.1
RBM38-201ENST00000342690 CT47B1P0C2W7 299 aaPredicted RBP28.19■■■□□ 2.1
RBM38-201ENST00000342690 HLFQ16534 295 aa28.18■■■□□ 2.1
RBM38-201ENST00000342690 TBC1D9BQ66K14 1250 aa28.18■■■□□ 2.1
RBM38-201ENST00000342690 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
RBM38-201ENST00000342690 ZBTB3Q9H5J0 574 aa28.18■■■□□ 2.1
RBM38-201ENST00000342690 PHAXQ9H814 394 aaKnown RBP28.18■■■□□ 2.1
RBM38-201ENST00000342690 NUP98P52948 1817 aa28.18■■■□□ 2.1
RBM38-201ENST00000342690 ERVV-1B6SEH8 477 aa28.17■■■□□ 2.1
RBM38-201ENST00000342690 TM4SF1P30408 202 aa28.17■■■□□ 2.1
RBM38-201ENST00000342690 DDR1Q08345 913 aa28.17■■■□□ 2.1
RBM38-201ENST00000342690 NFIXQ14938 502 aa28.17■■■□□ 2.1
RBM38-201ENST00000342690 RGL2O15211 777 aa28.16■■■□□ 2.1
RBM38-201ENST00000342690 CLEC4GQ6UXB4 293 aa28.16■■■□□ 2.1
RBM38-201ENST00000342690 PPP1R1BQ9UD71 204 aaPredicted RBP28.16■■■□□ 2.1
RBM38-201ENST00000342690 ZNF652Q9Y2D9 606 aa28.16■■■□□ 2.1
RBM38-201ENST00000342690 BICDL1Q6ZP65 573 aa28.15■■■□□ 2.1
RBM38-201ENST00000342690 ZNF428Q96B54 188 aa28.15■■■□□ 2.1
RBM38-201ENST00000342690 POLRMTO00411 1230 aaKnown RBP28.14■■■□□ 2.1
RBM38-201ENST00000342690 PARP3Q9Y6F1 533 aa28.14■■■□□ 2.1
RBM38-201ENST00000342690 CACNA1FO60840 1977 aa28.13■■■□□ 2.09
RBM38-201ENST00000342690 SLC4A2P04920 1241 aa28.13■■■□□ 2.09
RBM38-201ENST00000342690 AFDNP55196 1824 aaKnown RBP28.13■■■□□ 2.09
RBM38-201ENST00000342690 ARFGEF2Q9Y6D5 1785 aa28.12■■■□□ 2.09
RBM38-201ENST00000342690 GIGYF2Q6Y7W6 1299 aaKnown RBP28.12■■■□□ 2.09
RBM38-201ENST00000342690 NRXN2Q9P2S2 1712 aa28.12■■■□□ 2.09
RBM38-201ENST00000342690 ATP10DQ9P241 1426 aa28.11■■■□□ 2.09
RBM38-201ENST00000342690 G2E3Q7L622 706 aa28.11■■■□□ 2.09
RBM38-201ENST00000342690 ANKRD36CQ5JPF3 1778 aa28.11■■■□□ 2.09
RBM38-201ENST00000342690 ANKRD13DQ6ZTN6 518 aa28.1■■■□□ 2.09
RBM38-201ENST00000342690 PLBD2Q8NHP8 589 aa28.1■■■□□ 2.09
RBM38-201ENST00000342690 CARMIL3Q8ND23 1372 aa28.1■■■□□ 2.09
RBM38-201ENST00000342690 NIP7Q9Y221 180 aaKnown RBP eCLIP28.09■■■□□ 2.09
RBM38-201ENST00000342690 SERPINB2P05120 415 aa28.08■■■□□ 2.09
RBM38-201ENST00000342690 ALDH1L2Q3SY69 923 aa28.08■■■□□ 2.09
RBM38-201ENST00000342690 SETDB2Q96T68 719 aa28.08■■■□□ 2.09
RBM38-201ENST00000342690 FLIIQ13045 1269 aa28.07■■■□□ 2.08
RBM38-201ENST00000342690 KLHL34Q8N239 644 aa28.07■■■□□ 2.08
RBM38-201ENST00000342690 FHDC1Q9C0D6 1143 aaPredicted RBP28.07■■■□□ 2.08
RBM38-201ENST00000342690 C10orf71Q711Q0 1435 aa28.07■■■□□ 2.08
RBM38-201ENST00000342690 UBN2Q6ZU65 1347 aa28.06■■■□□ 2.08
RBM38-201ENST00000342690 KIF13BQ9NQT8 1826 aa28.06■■■□□ 2.08
RBM38-201ENST00000342690 DDX58O95786 925 aaKnown RBP28.05■■■□□ 2.08
RBM38-201ENST00000342690 GPTP24298 496 aa28.05■■■□□ 2.08
RBM38-201ENST00000342690 RIC3Q7Z5B4 369 aa28.05■■■□□ 2.08
RBM38-201ENST00000342690 ZNF34Q8IZ26 560 aa28.05■■■□□ 2.08
RBM38-201ENST00000342690 SSH1Q8WYL5 1049 aa28.05■■■□□ 2.08
RBM38-201ENST00000342690 ADCY9O60503 1353 aa28.04■■■□□ 2.08
RBM38-201ENST00000342690 TCIRG1Q13488 830 aa28.04■■■□□ 2.08
RBM38-201ENST00000342690 HSP90AB3PQ58FF7 597 aa28.04■■■□□ 2.08
RBM38-201ENST00000342690 MRPL50Q8N5N7 158 aaKnown RBP28.04■■■□□ 2.08
RBM38-201ENST00000342690 SMC4Q9NTJ3 1288 aa28.04■■■□□ 2.08
RBM38-201ENST00000342690 RARSP54136 660 aaKnown RBP28.03■■■□□ 2.08
RBM38-201ENST00000342690 BCL2L13Q9BXK5 485 aa28.03■■■□□ 2.08
RBM38-201ENST00000342690 SRCAPQ6ZRS2 3230 aa28.03■■■□□ 2.08
RBM38-201ENST00000342690 PI4KAP2A4QPH2 592 aa28.01■■■□□ 2.07
RBM38-201ENST00000342690 FKBP5Q13451 457 aaPredicted RBP28.01■■■□□ 2.07
RBM38-201ENST00000342690 KSR2Q6VAB6 950 aa28.01■■■□□ 2.07
RBM38-201ENST00000342690 PI4KAP1Q8N8J0 262 aa28.01■■■□□ 2.07
RBM38-201ENST00000342690 SYT17Q9BSW7 474 aa28.01■■■□□ 2.07
RBM38-201ENST00000342690 MAP3K2Q9Y2U5 619 aa28.01■■■□□ 2.07
RBM38-201ENST00000342690 FAM177BA6PVY3 158 aa28■■■□□ 2.07
RBM38-201ENST00000342690 PRR5LQ6MZQ0 368 aa28■■■□□ 2.07
RBM38-201ENST00000342690 NBPF5PQ86XG9 351 aaPredicted RBP28■■■□□ 2.07
RBM38-201ENST00000342690 CD2APQ9Y5K6 639 aa28■■■□□ 2.07
RBM38-201ENST00000342690 KIAA1551Q9HCM1 1747 aa28■■■□□ 2.07
RBM38-201ENST00000342690 PARP10Q53GL7 1025 aa27.99■■■□□ 2.07
RBM38-201ENST00000342690 SUSD4Q5VX71 490 aa27.99■■■□□ 2.07
RBM38-201ENST00000342690 CNBD1Q8NA66 436 aa27.99■■■□□ 2.07
RBM38-201ENST00000342690 ISCA1Q9BUE6 129 aa27.99■■■□□ 2.07
RBM38-201ENST00000342690 ANKRD31Q8N7Z5 1873 aa27.98■■■□□ 2.07
RBM38-201ENST00000342690 ATP5J2-PTCD1G3V325 749 aa27.98■■■□□ 2.07
RBM38-201ENST00000342690 CCDC24Q8N4L8 307 aa27.98■■■□□ 2.07
RBM38-201ENST00000342690 NLGN2Q8NFZ4 835 aa27.98■■■□□ 2.07
RBM38-201ENST00000342690 MYD88Q99836 296 aa27.98■■■□□ 2.07
RBM38-201ENST00000342690 METTL22Q9BUU2 404 aaPredicted RBP27.98■■■□□ 2.07
RBM38-201ENST00000342690 IBTKQ9P2D0 1353 aaPredicted RBP27.98■■■□□ 2.07
RBM38-201ENST00000342690 NLRP10Q86W26 655 aa27.97■■■□□ 2.07
RBM38-201ENST00000342690 RCAN3Q9UKA8 241 aa27.97■■■□□ 2.07
RBM38-201ENST00000342690 KIF16BQ96L93 1317 aa27.96■■■□□ 2.07
RBM38-201ENST00000342690 NTSR2O95665 410 aa27.96■■■□□ 2.07
RBM38-201ENST00000342690 NPHP1O15259 732 aa27.95■■■□□ 2.06
RBM38-201ENST00000342690 BRPF1P55201 1214 aaPredicted RBP27.95■■■□□ 2.06
RBM38-201ENST00000342690 TPTE2Q6XPS3 522 aa27.95■■■□□ 2.06
RBM38-201ENST00000342690 NYXQ9GZU5 481 aa27.95■■■□□ 2.06
RBM38-201ENST00000342690 PXDNLA1KZ92 1463 aa27.95■■■□□ 2.06
RBM38-201ENST00000342690 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
RBM38-201ENST00000342690 ST5P78524 1137 aa27.94■■■□□ 2.06
RBM38-201ENST00000342690 PPP1R42Q7Z4L9 355 aa27.94■■■□□ 2.06
RBM38-201ENST00000342690 DNAAF4Q8WXU2 420 aa27.94■■■□□ 2.06
RBM38-201ENST00000342690 F6X3S4 739 aa27.93■■■□□ 2.06
RBM38-201ENST00000342690 TRIM28Q13263 835 aaKnown RBP27.93■■■□□ 2.06
RBM38-201ENST00000342690 NUTM1Q86Y26 1132 aa27.93■■■□□ 2.06
RBM38-201ENST00000342690 UTP14AQ9BVJ6 771 aaKnown RBP27.93■■■□□ 2.06
RBM38-201ENST00000342690 ABCC12Q96J65 1359 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms