RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 VPS36Q86VN1 386 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 PPM1FP49593 454 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-202ENST00000342494 SPA17Q15506 151 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 FGFR1OPO95684 399 aaKnown RBP17.41■□□□□ 0.38
UBE3B-202ENST00000342494 GSTO1P78417 241 aa17.41■□□□□ 0.38
UBE3B-202ENST00000342494 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-202ENST00000342494 C14orf93Q9H972 538 aaKnown RBP17.41■□□□□ 0.38
UBE3B-202ENST00000342494 SLC4A8Q2Y0W8 1093 aa17.41■□□□□ 0.38
UBE3B-202ENST00000342494 MPHOSPH6Q99547 160 aaKnown RBP17.41■□□□□ 0.38
UBE3B-202ENST00000342494 ABCC5O15440 1437 aa17.41■□□□□ 0.38
UBE3B-202ENST00000342494 ANKRD13DQ6ZTN6 518 aa17.41■□□□□ 0.38
UBE3B-202ENST00000342494 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 MTERF4Q7Z6M4 381 aaKnown RBP17.4■□□□□ 0.38
UBE3B-202ENST00000342494 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 LEKR1Q6ZMV7 388 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 CRNKL1Q9BZJ0 848 aaKnown RBP17.4■□□□□ 0.38
UBE3B-202ENST00000342494 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 ANAPC15P60006 121 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 SMARCC1Q92922 1105 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-202ENST00000342494 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 NSD2O96028 1365 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 CCT2P78371 535 aaKnown RBP17.4■□□□□ 0.38
UBE3B-202ENST00000342494 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
UBE3B-202ENST00000342494 DDB1Q16531 1140 aa17.39■□□□□ 0.37
UBE3B-202ENST00000342494 OGFOD1Q8N543 542 aa17.39■□□□□ 0.37
UBE3B-202ENST00000342494 JARID2Q92833 1246 aaPredicted RBP17.39■□□□□ 0.37
UBE3B-202ENST00000342494 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
UBE3B-202ENST00000342494 TCP11L1Q9NUJ3 509 aa17.38■□□□□ 0.37
UBE3B-202ENST00000342494 GRM1Q13255 1194 aa17.38■□□□□ 0.37
UBE3B-202ENST00000342494 CALML4Q96GE6 196 aa17.38■□□□□ 0.37
UBE3B-202ENST00000342494 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
UBE3B-202ENST00000342494 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
UBE3B-202ENST00000342494 ANO10Q9NW15 660 aa17.38■□□□□ 0.37
UBE3B-202ENST00000342494 CETN1Q12798 172 aa17.38■□□□□ 0.37
UBE3B-202ENST00000342494 FAM83GA6ND36 823 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 ANXA1P04083 346 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 FAM193AP78312 1265 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 DRC1Q96MC2 740 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 LIMCH1Q9UPQ0 1083 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
UBE3B-202ENST00000342494 EIF3JO75822 258 aaKnown RBP17.37■□□□□ 0.37
UBE3B-202ENST00000342494 HAND2P61296 217 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 CCDC144CPQ8IYA2 1237 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 DHX29Q7Z478 1369 aaKnown RBP17.37■□□□□ 0.37
UBE3B-202ENST00000342494 CCDC148Q8NFR7 591 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 GRPEL1Q9HAV7 217 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 STX8Q9UNK0 236 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
UBE3B-202ENST00000342494 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
UBE3B-202ENST00000342494 IDEP14735 1019 aa17.36■□□□□ 0.37
UBE3B-202ENST00000342494 CNNM3Q8NE01 707 aa17.36■□□□□ 0.37
UBE3B-202ENST00000342494 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
UBE3B-202ENST00000342494 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
UBE3B-202ENST00000342494 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
UBE3B-202ENST00000342494 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-202ENST00000342494 TRIM27P14373 513 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 AMPD3Q01432 767 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 STXBP4Q6ZWJ1 553 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 ZGPATQ8N5A5 531 aaKnown RBP17.35■□□□□ 0.37
UBE3B-202ENST00000342494 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBE3B-202ENST00000342494 MCM4P33991 863 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 NCOA7Q8NI08 942 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 POLD1P28340 1107 aa17.35■□□□□ 0.37
UBE3B-202ENST00000342494 GOLGA6L7A0A1B0GV03 622 aa17.34■□□□□ 0.37
UBE3B-202ENST00000342494 SYCE3A1L190 88 aa17.34■□□□□ 0.37
UBE3B-202ENST00000342494 TCERG1LQ5VWI1 586 aa17.34■□□□□ 0.37
UBE3B-202ENST00000342494 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBE3B-202ENST00000342494 METAP2P50579 478 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBE3B-202ENST00000342494 TAF3Q5VWG9 929 aa17.34■□□□□ 0.37
UBE3B-202ENST00000342494 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
UBE3B-202ENST00000342494 MACROD2A1Z1Q3 448 aa17.33■□□□□ 0.37
UBE3B-202ENST00000342494 TDRD12Q587J7 1177 aaKnown RBP17.33■□□□□ 0.37
UBE3B-202ENST00000342494 KIAA0754O94854 1291 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 SYCP3Q8IZU3 236 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 TSPY3P0CV98 308 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 TSPY8P0CW00 308 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 UBA7P41226 1012 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 NBPF14Q5TI25 921 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 WDR97A6NE52 1622 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 CYP7A1P22680 504 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
UBE3B-202ENST00000342494 ANKRD36BQ8N2N9 1353 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC40Q4G0X9 1142 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 IQSEC3Q9UPP2 1182 aaPredicted RBP17.32■□□□□ 0.36
UBE3B-202ENST00000342494 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
UBE3B-202ENST00000342494 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms