RNA–Protein interactions for RNA: ENST00000342404.7

CCDC83-202, Transcript of coiled-coil domain containing 83, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC83, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-202ENST00000342404 SRCIN1Q9C0H9 1055 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 GNPATO15228 680 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 NEXNQ0ZGT2 675 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 SMIM5Q71RC9 77 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 MEIS3Q99687 375 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 MYD88Q99836 296 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 ARFGEF2Q9Y6D5 1785 aa10.92□□□□□ -0.66
CCDC83-202ENST00000342404 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
CCDC83-202ENST00000342404 IL6STP40189 918 aaPredicted RBP10.91□□□□□ -0.66
CCDC83-202ENST00000342404 TAF1LQ8IZX4 1826 aa10.91□□□□□ -0.66
CCDC83-202ENST00000342404 PXDNLA1KZ92 1463 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
CCDC83-202ENST00000342404 PHF14O94880 888 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
CCDC83-202ENST00000342404 PLBD2Q8NHP8 589 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 AK7Q96M32 723 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.66
CCDC83-202ENST00000342404 COL15A1P39059 1388 aa10.89□□□□□ -0.67
CCDC83-202ENST00000342404 AFDNP55196 1824 aaKnown RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 METTL22Q9BUU2 404 aaPredicted RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 CHMP4BQ9H444 224 aaKnown RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 C9orf78Q9NZ63 289 aaPredicted RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
CCDC83-202ENST00000342404 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
CCDC83-202ENST00000342404 EIF5P55010 431 aaKnown RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 SF3B2Q13435 895 aaKnown RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 HLFQ16534 295 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 SLC27A3Q5K4L6 730 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 LINS1Q8NG48 757 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 RTCBQ9Y3I0 505 aaKnown RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 PCDHB15Q9Y5E8 787 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 C4BP0C0L5 1744 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 NUP188Q5SRE5 1749 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 IGKV5-2P06315 115 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 UBTFL1P0CB47 393 aaPredicted RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 GPTP24298 496 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 EN1Q05925 392 aaPredicted RBP10.88□□□□□ -0.67
CCDC83-202ENST00000342404 PROM2Q8N271 834 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 MAP3K15Q6ZN16 1313 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 ATP10DQ9P241 1426 aa10.88□□□□□ -0.67
CCDC83-202ENST00000342404 NEURL1BA8MQ27 555 aa10.87□□□□□ -0.67
CCDC83-202ENST00000342404 PLSCR1O15162 318 aa10.87□□□□□ -0.67
CCDC83-202ENST00000342404 AMIGO3Q86WK7 504 aa10.87□□□□□ -0.67
CCDC83-202ENST00000342404 JARID2Q92833 1246 aaPredicted RBP10.87□□□□□ -0.67
CCDC83-202ENST00000342404 USP44Q9H0E7 712 aa10.87□□□□□ -0.67
CCDC83-202ENST00000342404 NUP98P52948 1817 aa10.86□□□□□ -0.67
CCDC83-202ENST00000342404 RREB1Q92766 1687 aa10.86□□□□□ -0.67
CCDC83-202ENST00000342404 GRM8O00222 908 aa10.86□□□□□ -0.67
CCDC83-202ENST00000342404 GNAI2P04899 355 aa10.86□□□□□ -0.67
CCDC83-202ENST00000342404 GNAI3P08754 354 aa10.86□□□□□ -0.67
CCDC83-202ENST00000342404 AAMPQ13685 434 aa10.86□□□□□ -0.67
CCDC83-202ENST00000342404 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
CCDC83-202ENST00000342404 LRRFIP2Q9Y608 721 aaKnown RBP10.86□□□□□ -0.67
CCDC83-202ENST00000342404 A0A087WZG4 1122 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 RPS6KA4O75676 772 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 GCKRQ14397 625 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
CCDC83-202ENST00000342404 GIGYF2Q6Y7W6 1299 aaKnown RBP10.85□□□□□ -0.67
CCDC83-202ENST00000342404 UBE3BQ7Z3V4 1068 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 DEFB132Q7Z7B7 95 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 BCL11AQ9H165 835 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 CWC25Q9NXE8 425 aaPredicted RBP10.85□□□□□ -0.67
CCDC83-202ENST00000342404 TFCP2L1Q9NZI6 479 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
CCDC83-202ENST00000342404 ZPR1O75312 459 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 IGHDP01880 384 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 RFC4P35249 363 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 TCIRG1Q13488 830 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
CCDC83-202ENST00000342404 SRP68Q9UHB9 627 aaKnown RBP10.85□□□□□ -0.67
CCDC83-202ENST00000342404 UTRNP46939 3433 aa10.84□□□□□ -0.67
CCDC83-202ENST00000342404 CAMTA2O94983 1202 aa10.84□□□□□ -0.67
CCDC83-202ENST00000342404 BAG6P46379 1132 aa10.84□□□□□ -0.67
CCDC83-202ENST00000342404 HSP90AB3PQ58FF7 597 aa10.84□□□□□ -0.67
CCDC83-202ENST00000342404 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
CCDC83-202ENST00000342404 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
CCDC83-202ENST00000342404 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
CCDC83-202ENST00000342404 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 ERVV-1B6SEH8 477 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 ZNF827Q17R98 1081 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 USPL1Q5W0Q7 1092 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC83-202ENST00000342404 ANKRD36CQ5JPF3 1778 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 C4AP0C0L4 1744 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 CEP85Q6P2H3 762 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 CCDC191Q8NCU4 936 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
CCDC83-202ENST00000342404 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms