RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 TBC1D2BQ9UPU7 963 aa24.4■■□□□ 1.5
GTF3C5-201ENST00000342018 NEXNQ0ZGT2 675 aa24.39■■□□□ 1.5
GTF3C5-201ENST00000342018 CWF19L2Q2TBE0 894 aaKnown RBP24.39■■□□□ 1.5
GTF3C5-201ENST00000342018 METTL22Q9BUU2 404 aaPredicted RBP24.39■■□□□ 1.5
GTF3C5-201ENST00000342018 CNTNAP4Q9C0A0 1308 aa24.39■■□□□ 1.5
GTF3C5-201ENST00000342018 EIF5P55010 431 aaKnown RBP24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 TXNRD1Q16881 649 aa24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 SLC27A3Q5K4L6 730 aa24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 SMIM5Q71RC9 77 aa24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 DZIP3Q86Y13 1208 aaKnown RBP24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 MEIS3Q99687 375 aa24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 C1orf115Q9H7X2 142 aa24.39■■□□□ 1.49
GTF3C5-201ENST00000342018 GNPATO15228 680 aa24.38■■□□□ 1.49
GTF3C5-201ENST00000342018 CHMP4BQ9H444 224 aaKnown RBP24.38■■□□□ 1.49
GTF3C5-201ENST00000342018 ZBTB40Q9NUA8 1239 aa24.38■■□□□ 1.49
GTF3C5-201ENST00000342018 ARFGEF2Q9Y6D5 1785 aa24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 ATP5J2-PTCD1G3V325 749 aa24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 PLSCR1O15162 318 aa24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 PROM2Q8N271 834 aa24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 TAF1LQ8IZX4 1826 aa24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 RREB1Q92766 1687 aa24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 TNS1Q9HBL0 1735 aaKnown RBP24.37■■□□□ 1.49
GTF3C5-201ENST00000342018 RC3H1Q5TC82 1133 aaKnown RBP24.36■■□□□ 1.49
GTF3C5-201ENST00000342018 ATP10DQ9P241 1426 aa24.36■■□□□ 1.49
GTF3C5-201ENST00000342018 LINS1Q8NG48 757 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 AK7Q96M32 723 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 MAP3K15Q6ZN16 1313 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 COL15A1P39059 1388 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 IGKV5-2P06315 115 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 PCDHB15Q9Y5E8 787 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 C4BP0C0L5 1744 aa24.35■■□□□ 1.49
GTF3C5-201ENST00000342018 AAMPQ13685 434 aa24.34■■□□□ 1.49
GTF3C5-201ENST00000342018 N4BP2Q86UW6 1770 aaPredicted RBP24.34■■□□□ 1.49
GTF3C5-201ENST00000342018 HLFQ16534 295 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 RTCBQ9Y3I0 505 aaKnown RBP24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 NUP188Q5SRE5 1749 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 NEURL1BA8MQ27 555 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 RPS6KA4O75676 772 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 ALDH1L1O75891 902 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 PHF14O94880 888 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 SF3B2Q13435 895 aaKnown RBP24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 USP44Q9H0E7 712 aa24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 C9orf78Q9NZ63 289 aaPredicted RBP24.33■■□□□ 1.49
GTF3C5-201ENST00000342018 EN1Q05925 392 aaPredicted RBP24.31■■□□□ 1.48
GTF3C5-201ENST00000342018 AMIGO3Q86WK7 504 aa24.31■■□□□ 1.48
GTF3C5-201ENST00000342018 A0A087WZG4 1122 aa24.3■■□□□ 1.48
GTF3C5-201ENST00000342018 GNAI3P08754 354 aa24.3■■□□□ 1.48
GTF3C5-201ENST00000342018 UBTFL1P0CB47 393 aaPredicted RBP24.3■■□□□ 1.48
GTF3C5-201ENST00000342018 GIGYF2Q6Y7W6 1299 aaKnown RBP24.3■■□□□ 1.48
GTF3C5-201ENST00000342018 NBPF7P0C2Y1 421 aaPredicted RBP24.29■■□□□ 1.48
GTF3C5-201ENST00000342018 TCIRG1Q13488 830 aa24.29■■□□□ 1.48
GTF3C5-201ENST00000342018 ERVV-1B6SEH8 477 aa24.29■■□□□ 1.48
GTF3C5-201ENST00000342018 GPTP24298 496 aa24.29■■□□□ 1.48
GTF3C5-201ENST00000342018 AFDNP55196 1824 aaKnown RBP24.28■■□□□ 1.48
GTF3C5-201ENST00000342018 CAMTA2O94983 1202 aa24.28■■□□□ 1.48
GTF3C5-201ENST00000342018 GCKRQ14397 625 aa24.28■■□□□ 1.48
GTF3C5-201ENST00000342018 EZH2Q15910 746 aaKnown RBP24.28■■□□□ 1.48
GTF3C5-201ENST00000342018 JARID2Q92833 1246 aaPredicted RBP24.28■■□□□ 1.48
GTF3C5-201ENST00000342018 GNAI2P04899 355 aa24.27■■□□□ 1.48
GTF3C5-201ENST00000342018 GRM8O00222 908 aa24.27■■□□□ 1.48
GTF3C5-201ENST00000342018 LRRFIP2Q9Y608 721 aaKnown RBP24.27■■□□□ 1.48
GTF3C5-201ENST00000342018 HSP90AB3PQ58FF7 597 aa24.26■■□□□ 1.47
GTF3C5-201ENST00000342018 TRAPPC3LQ5T215 181 aa24.26■■□□□ 1.47
GTF3C5-201ENST00000342018 DEFB132Q7Z7B7 95 aa24.26■■□□□ 1.47
GTF3C5-201ENST00000342018 ARHGEF1Q92888 912 aaKnown RBP24.26■■□□□ 1.47
GTF3C5-201ENST00000342018 CWC25Q9NXE8 425 aaPredicted RBP24.26■■□□□ 1.47
GTF3C5-201ENST00000342018 IGHDP01880 384 aa24.25■■□□□ 1.47
GTF3C5-201ENST00000342018 RTL5Q5HYW3 569 aaPredicted RBP24.25■■□□□ 1.47
GTF3C5-201ENST00000342018 SRP68Q9UHB9 627 aaKnown RBP24.25■■□□□ 1.47
GTF3C5-201ENST00000342018 BAG6P46379 1132 aa24.25■■□□□ 1.47
GTF3C5-201ENST00000342018 CAMKK2Q96RR4 588 aa24.25■■□□□ 1.47
GTF3C5-201ENST00000342018 ISCA1Q9BUE6 129 aa24.25■■□□□ 1.47
GTF3C5-201ENST00000342018 NUP98P52948 1817 aa24.24■■□□□ 1.47
GTF3C5-201ENST00000342018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
GTF3C5-201ENST00000342018 ZPR1O75312 459 aa24.24■■□□□ 1.47
GTF3C5-201ENST00000342018 RFC4P35249 363 aa24.24■■□□□ 1.47
GTF3C5-201ENST00000342018 USPL1Q5W0Q7 1092 aa24.24■■□□□ 1.47
GTF3C5-201ENST00000342018 ZNF827Q17R98 1081 aa24.23■■□□□ 1.47
GTF3C5-201ENST00000342018 UBE3BQ7Z3V4 1068 aa24.23■■□□□ 1.47
GTF3C5-201ENST00000342018 CCDC191Q8NCU4 936 aa24.23■■□□□ 1.47
GTF3C5-201ENST00000342018 HMGB2P26583 209 aaKnown RBP24.23■■□□□ 1.47
GTF3C5-201ENST00000342018 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
GTF3C5-201ENST00000342018 NARFQ9UHQ1 456 aa24.23■■□□□ 1.47
GTF3C5-201ENST00000342018 RWDD1Q9H446 243 aaPredicted RBP24.22■■□□□ 1.47
GTF3C5-201ENST00000342018 ZNF652Q9Y2D9 606 aa24.22■■□□□ 1.47
GTF3C5-201ENST00000342018 RGPD3A6NKT7 1758 aaPredicted RBP24.22■■□□□ 1.47
GTF3C5-201ENST00000342018 RGPD4Q7Z3J3 1758 aa24.22■■□□□ 1.47
GTF3C5-201ENST00000342018 CEP85Q6P2H3 762 aa24.22■■□□□ 1.47
GTF3C5-201ENST00000342018 FAM177BA6PVY3 158 aa24.21■■□□□ 1.47
GTF3C5-201ENST00000342018 NLRP10Q86W26 655 aa24.21■■□□□ 1.47
GTF3C5-201ENST00000342018 SUCLG2Q96I99 432 aa24.21■■□□□ 1.47
GTF3C5-201ENST00000342018 UBR3Q6ZT12 1888 aa24.2■■□□□ 1.47
GTF3C5-201ENST00000342018 SIRT2Q8IXJ6 389 aa24.2■■□□□ 1.46
GTF3C5-201ENST00000342018 TRIM28Q13263 835 aaKnown RBP24.2■■□□□ 1.46
GTF3C5-201ENST00000342018 BICDL1Q6ZP65 573 aa24.2■■□□□ 1.46
GTF3C5-201ENST00000342018 ZNF34Q8IZ26 560 aa24.2■■□□□ 1.46
GTF3C5-201ENST00000342018 AKT1S1Q96B36 256 aa24.2■■□□□ 1.46
GTF3C5-201ENST00000342018 NIP7Q9Y221 180 aaKnown RBP eCLIP24.2■■□□□ 1.46
GTF3C5-201ENST00000342018 UTYO14607 1347 aa24.19■■□□□ 1.46
GTF3C5-201ENST00000342018 UBN2Q6ZU65 1347 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms