RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 ERLIN1O75477 346 aa8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 MRPL12P52815 198 aaKnown RBP8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 VPS36Q86VN1 386 aa8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 ZNF397Q8NF99 534 aaPredicted RBP8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 TSG101Q99816 390 aa8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 NUP62CLQ9H1M0 184 aa8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 TBX22Q9Y458 520 aa8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 BAG4O95429 457 aaKnown RBP8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 ANKRD24Q8TF21 1146 aa8.99□□□□□ -0.97
ATP2B4-201ENST00000341360 ZNF213O14771 459 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 GNAQP50148 359 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 XPCQ01831 940 aaPredicted RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 FBXO31Q5XUX0 539 aaPredicted RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 CWC27Q6UX04 472 aaKnown RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 CATIPQ7Z7H3 387 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 CWC15Q9P013 229 aaKnown RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 HDAC9Q9UKV0 1011 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 ZCRB1Q8TBF4 217 aaKnown RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 SSH1Q8WYL5 1049 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 PBRM1Q86U86 1689 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 FLT4P35916 1363 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 AMPD3Q01432 767 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 AKAP4Q5JQC9 854 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 BICDL1Q6ZP65 573 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 GOLGA6L10A6NI86 522 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 CETN1Q12798 172 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 JAKMIP3Q5VZ66 844 aa8.98□□□□□ -0.97
ATP2B4-201ENST00000341360 PLCG2P16885 1265 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 RFC4P35249 363 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 MCM10Q7L590 875 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 TANGO6Q9C0B7 1094 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 IL1RAPL2Q9NP60 686 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 KANK3Q6NY19 840 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 LRRC59Q96AG4 307 aaKnown RBP8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 ZHX3Q9H4I2 956 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 EMILIN1Q9Y6C2 1016 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 KDM5DQ9BY66 1539 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 IGHDP01880 384 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 CCDC181Q5TID7 509 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 LDHAL6AQ6ZMR3 332 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 PKNOX2Q96KN3 472 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 CRNKL1Q9BZJ0 848 aaKnown RBP8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 SLC12A7Q9Y666 1083 aa8.97□□□□□ -0.97
ATP2B4-201ENST00000341360 CCDC194A0A1B0GVG4 234 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 FKBP15Q5T1M5 1219 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 CCDC150Q8NCX0 1101 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 UPF3BQ9BZI7 483 aaKnown RBP8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 ANO10Q9NW15 660 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 SKAP1Q86WV1 359 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 CERS3Q8IU89 383 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 C8orf76Q96K31 380 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 CNNM2Q9H8M5 875 aa8.96□□□□□ -0.97
ATP2B4-201ENST00000341360 MAP3K11Q16584 847 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 ZSCAN30Q86W11 494 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 ABCC2Q92887 1545 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 EIF3JO75822 258 aaKnown RBP8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 HSPA2P54652 639 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC191Q8NCU4 936 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 TAF4BQ92750 862 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 GBP3Q9H0R5 595 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 EXOC6BQ9Y2D4 811 aa8.96□□□□□ -0.98
ATP2B4-201ENST00000341360 ARHGEF5Q12774 1597 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 DISP1Q96F81 1524 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 SSBP05455 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 CASTP20810 708 aaKnown RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 HDAC1Q13547 482 aaPredicted RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 BMP2KLQ5H9B9 411 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 ANKRD13DQ6ZTN6 518 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 LIMCH1Q9UPQ0 1083 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 C6orf229H3BNL8 230 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 EZRP15311 586 aaKnown RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 IL15P40933 162 aaPredicted RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 NBPF14Q5TI25 921 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 USP37Q86T82 979 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 SNX21Q969T3 373 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 NLRP3Q96P20 1036 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 SSRP1Q08945 709 aaKnown RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 KRT23Q9C075 422 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 NBPF7P0C2Y1 421 aaPredicted RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC96Q2M329 555 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC148Q8NFR7 591 aa8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 DDX19AQ9NUU7 478 aaKnown RBP8.95□□□□□ -0.98
ATP2B4-201ENST00000341360 NEMFO60524 1076 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 GNAT2P19087 354 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 EIF5P55010 431 aaKnown RBP8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 STK3Q13188 491 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 NBPF6Q5VWK0 638 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 NBPF5PQ86XG9 351 aaPredicted RBP8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 NBPF4Q96M43 638 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 EYA3Q99504 573 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 BCL11BQ9C0K0 894 aaPredicted RBP8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 MINDY4BA8MYZ0 360 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 XRCC6P12956 609 aaKnown RBP eCLIP8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 MCM3P25205 808 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 DDB1Q16531 1140 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 FAM114A1Q8IWE2 563 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms