RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
TNC-201ENST00000341037 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
TNC-201ENST00000341037 SSFA2P28290 1259 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
TNC-201ENST00000341037 CLIP2Q9UDT6 1046 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
TNC-201ENST00000341037 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNC-201ENST00000341037 FLIIQ13045 1269 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 BIN1O00499 593 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 KIF5CO60282 957 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
TNC-201ENST00000341037 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 FSIP1Q8NA03 581 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNC-201ENST00000341037 RFC4P35249 363 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 SAMM50Q9Y512 469 aa13.18□□□□□ -0.3
TNC-201ENST00000341037 NOS1P29475 1434 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 TSPY2A6NKD2 308 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 USP8P40818 1118 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 PTPN14Q15678 1187 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 ANKRD24Q8TF21 1146 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 UBXN4Q92575 508 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
TNC-201ENST00000341037 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 PTPRCP08575 1304 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
TNC-201ENST00000341037 MAP2K1Q02750 393 aaPredicted RBP13.17□□□□□ -0.3
TNC-201ENST00000341037 TTF1Q15361 905 aaPredicted RBP13.17□□□□□ -0.3
TNC-201ENST00000341037 VPS36Q86VN1 386 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
TNC-201ENST00000341037 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 ST5P78524 1137 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 CRACR2AQ9BSW2 395 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 PLEKHH1Q9ULM0 1364 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 ABCC5O15440 1437 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 PLB1Q6P1J6 1458 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 GSTTP1A0A1W2PQM5 241 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 URI1O94763 535 aaPredicted RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 ANXA1P04083 346 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
TNC-201ENST00000341037 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
TNC-201ENST00000341037 TRIM27P14373 513 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
TNC-201ENST00000341037 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 PRXQ9BXM0 1461 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
TNC-201ENST00000341037 PDIA4P13667 645 aaKnown RBP13.15□□□□□ -0.3
TNC-201ENST00000341037 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNC-201ENST00000341037 CCDC40Q4G0X9 1142 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 PDE4BQ07343 736 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 IFFO1Q0D2I5 559 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 SYCP3Q8IZU3 236 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 CABP5Q9NP86 173 aa13.15□□□□□ -0.3
TNC-201ENST00000341037 PSMD1Q99460 953 aa13.15□□□□□ -0.31
TNC-201ENST00000341037 CTNNA2P26232 953 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 YEATS4O95619 227 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 FBLN1P23142 703 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 CA8P35219 290 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
TNC-201ENST00000341037 BAG3O95817 575 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 IDEP14735 1019 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
TNC-201ENST00000341037 KIF5BP33176 963 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
TNC-201ENST00000341037 BICD1Q96G01 975 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 PRC1O43663 620 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
TNC-201ENST00000341037 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms