RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 DDX46Q7L014 1031 aaKnown RBP22.64■■□□□ 1.22
CDK13-202ENST00000340829 USP25Q9UHP3 1055 aa22.64■■□□□ 1.22
CDK13-202ENST00000340829 HSP90B2PQ58FF3 399 aa22.64■■□□□ 1.21
CDK13-202ENST00000340829 GCC2Q8IWJ2 1684 aa22.64■■□□□ 1.21
CDK13-202ENST00000340829 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.21
CDK13-202ENST00000340829 GOLGA8BA8MQT2 603 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 CBFA2T2O43439 604 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 KLHL40Q2TBA0 621 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 HAND2P61296 217 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 RUFY1Q96T51 708 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 TCEANC2Q96MN5 208 aa22.63■■□□□ 1.21
CDK13-202ENST00000340829 PA2G4Q9UQ80 394 aaKnown RBP22.63■■□□□ 1.21
CDK13-202ENST00000340829 SPATA31E1Q6ZUB1 1445 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 CAVIN4Q5BKX8 364 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 KSR2Q6VAB6 950 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 GRM8O00222 908 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 NEK1Q96PY6 1258 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 CADPS2Q86UW7 1296 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 NECAB1Q8N987 351 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 SLC5A1P13866 664 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 STIM1Q13586 685 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 TRIM35Q9UPQ4 493 aa22.62■■□□□ 1.21
CDK13-202ENST00000340829 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
CDK13-202ENST00000340829 EXOC5O00471 708 aa22.61■■□□□ 1.21
CDK13-202ENST00000340829 ZBTB7BO15156 539 aaPredicted RBP22.61■■□□□ 1.21
CDK13-202ENST00000340829 ACBD3Q9H3P7 528 aa22.61■■□□□ 1.21
CDK13-202ENST00000340829 SMTNL1A8MU46 457 aa22.61■■□□□ 1.21
CDK13-202ENST00000340829 SNX21Q969T3 373 aa22.61■■□□□ 1.21
CDK13-202ENST00000340829 ZMYM3Q14202 1370 aa22.6■■□□□ 1.21
CDK13-202ENST00000340829 DHX8Q14562 1220 aaKnown RBP22.6■■□□□ 1.21
CDK13-202ENST00000340829 ZHX3Q9H4I2 956 aa22.6■■□□□ 1.21
CDK13-202ENST00000340829 ALDH1L1O75891 902 aa22.6■■□□□ 1.21
CDK13-202ENST00000340829 CFAP100Q494V2 611 aa22.6■■□□□ 1.21
CDK13-202ENST00000340829 RBM5P52756 815 aaKnown RBP eCLIP22.6■■□□□ 1.21
CDK13-202ENST00000340829 IL13P35225 146 aa22.59■■□□□ 1.21
CDK13-202ENST00000340829 RAB11FIP4Q86YS3 637 aa22.59■■□□□ 1.21
CDK13-202ENST00000340829 ZNHIT6Q9NWK9 470 aaKnown RBP22.59■■□□□ 1.21
CDK13-202ENST00000340829 CT47A1Q5JQC4 288 aaPredicted RBP22.59■■□□□ 1.21
CDK13-202ENST00000340829 ANO10Q9NW15 660 aa22.59■■□□□ 1.21
CDK13-202ENST00000340829 SLC12A7Q9Y666 1083 aa22.59■■□□□ 1.21
CDK13-202ENST00000340829 KDM2BQ8NHM5 1336 aa22.58■■□□□ 1.21
CDK13-202ENST00000340829 G2E3Q7L622 706 aa22.58■■□□□ 1.21
CDK13-202ENST00000340829 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
CDK13-202ENST00000340829 MAP3K5Q99683 1374 aa22.58■■□□□ 1.21
CDK13-202ENST00000340829 IFIT3O14879 490 aaKnown RBP22.58■■□□□ 1.21
CDK13-202ENST00000340829 KCNA6P17658 529 aa22.58■■□□□ 1.21
CDK13-202ENST00000340829 CWF19L2Q2TBE0 894 aaKnown RBP22.58■■□□□ 1.21
CDK13-202ENST00000340829 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.21
CDK13-202ENST00000340829 PHAXQ9H814 394 aaKnown RBP22.58■■□□□ 1.2
CDK13-202ENST00000340829 HMG20BQ9P0W2 317 aa22.58■■□□□ 1.2
CDK13-202ENST00000340829 RBM8AQ9Y5S9 174 aaKnown RBP22.58■■□□□ 1.2
CDK13-202ENST00000340829 KDM6BO15054 1643 aa22.58■■□□□ 1.2
CDK13-202ENST00000340829 PTPRTO14522 1441 aa22.58■■□□□ 1.2
CDK13-202ENST00000340829 RANBP6O60518 1105 aaKnown RBP22.58■■□□□ 1.2
CDK13-202ENST00000340829 ZPR1O75312 459 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 ZSCAN23Q3MJ62 389 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 HOXC9P31274 260 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 LMBR1LQ6UX01 489 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
CDK13-202ENST00000340829 BRF1Q92994 677 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 TEX13AQ9BXU3 409 aaPredicted RBP22.57■■□□□ 1.2
CDK13-202ENST00000340829 GOLGA8AA7E2F4 631 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 AK7Q96M32 723 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 LRRC2Q9BYS8 371 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 CEP131Q9UPN4 1083 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
CDK13-202ENST00000340829 MSH6P52701 1360 aa22.56■■□□□ 1.2
CDK13-202ENST00000340829 SSBP05455 408 aaKnown RBP eCLIP22.56■■□□□ 1.2
CDK13-202ENST00000340829 USP5P45974 858 aa22.56■■□□□ 1.2
CDK13-202ENST00000340829 ZSCAN29Q8IWY8 852 aaPredicted RBP22.56■■□□□ 1.2
CDK13-202ENST00000340829 FSIP1Q8NA03 581 aa22.56■■□□□ 1.2
CDK13-202ENST00000340829 ANAPC15P60006 121 aa22.56■■□□□ 1.2
CDK13-202ENST00000340829 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
CDK13-202ENST00000340829 CCDC144CPQ8IYA2 1237 aa22.56■■□□□ 1.2
CDK13-202ENST00000340829 ZSCAN22P10073 491 aaPredicted RBP22.56■■□□□ 1.2
CDK13-202ENST00000340829 NFATC2IPQ8NCF5 419 aa22.55■■□□□ 1.2
CDK13-202ENST00000340829 ZCRB1Q8TBF4 217 aaKnown RBP22.55■■□□□ 1.2
CDK13-202ENST00000340829 DDX19AQ9NUU7 478 aaKnown RBP22.55■■□□□ 1.2
CDK13-202ENST00000340829 UBE2HP62256 183 aa22.55■■□□□ 1.2
CDK13-202ENST00000340829 LINS1Q8NG48 757 aa22.55■■□□□ 1.2
CDK13-202ENST00000340829 TANGO6Q9C0B7 1094 aa22.55■■□□□ 1.2
CDK13-202ENST00000340829 MKNK2Q9HBH9 465 aa22.54■■□□□ 1.2
CDK13-202ENST00000340829 ANKIB1Q9P2G1 1089 aa22.54■■□□□ 1.2
CDK13-202ENST00000340829 GCP02774 474 aa22.53■■□□□ 1.2
CDK13-202ENST00000340829 OTUD7AQ8TE49 926 aaPredicted RBP22.53■■□□□ 1.2
CDK13-202ENST00000340829 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
CDK13-202ENST00000340829 DZIP1Q86YF9 867 aaKnown RBP22.53■■□□□ 1.2
CDK13-202ENST00000340829 POLR3DP05423 398 aaPredicted RBP22.53■■□□□ 1.2
CDK13-202ENST00000340829 MICU3Q86XE3 530 aa22.53■■□□□ 1.2
CDK13-202ENST00000340829 CTCFLQ8NI51 663 aaPredicted RBP22.53■■□□□ 1.2
CDK13-202ENST00000340829 ORC3Q9UBD5 711 aaPredicted RBP22.53■■□□□ 1.2
CDK13-202ENST00000340829 CNPY2Q9Y2B0 182 aa22.53■■□□□ 1.2
CDK13-202ENST00000340829 KLHL10Q6JEL2 608 aa22.52■■□□□ 1.2
CDK13-202ENST00000340829 DEF6Q9H4E7 631 aa22.52■■□□□ 1.2
CDK13-202ENST00000340829 SFPQP23246 707 aaKnown RBP eCLIP22.52■■□□□ 1.2
CDK13-202ENST00000340829 IQCA1Q86XH1 822 aa22.52■■□□□ 1.2
CDK13-202ENST00000340829 CLIP2Q9UDT6 1046 aa22.52■■□□□ 1.2
CDK13-202ENST00000340829 SSRP1Q08945 709 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms