RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 PRPF40BQ6NWY9 871 aaKnown RBP18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 TNS4Q8IZW8 715 aa18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 TAOK3Q9H2K8 898 aa18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 CEMIPQ8WUJ3 1361 aa18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 DDNO94850 711 aaPredicted RBP18.5■□□□□ 0.55
UPK3BL1-201ENST00000340457 HSPA1AP0DMV8 641 aaKnown RBP18.5■□□□□ 0.55
UPK3BL1-201ENST00000340457 HSPA1BP0DMV9 641 aaKnown RBP18.5■□□□□ 0.55
UPK3BL1-201ENST00000340457 SRGNP10124 158 aa18.5■□□□□ 0.55
UPK3BL1-201ENST00000340457 ST5P78524 1137 aa18.5■□□□□ 0.55
UPK3BL1-201ENST00000340457 CNKSR1Q969H4 720 aa18.49■□□□□ 0.55
UPK3BL1-201ENST00000340457 RSPH6AQ9H0K4 717 aa18.49■□□□□ 0.55
UPK3BL1-201ENST00000340457 NPC1L1Q9UHC9 1359 aa18.49■□□□□ 0.55
UPK3BL1-201ENST00000340457 STYK1Q6J9G0 422 aa18.49■□□□□ 0.55
UPK3BL1-201ENST00000340457 MCM10Q7L590 875 aa18.49■□□□□ 0.55
UPK3BL1-201ENST00000340457 FAM177BA6PVY3 158 aa18.48■□□□□ 0.55
UPK3BL1-201ENST00000340457 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
UPK3BL1-201ENST00000340457 NBPF5PQ86XG9 351 aaPredicted RBP18.48■□□□□ 0.55
UPK3BL1-201ENST00000340457 MASTLQ96GX5 879 aa18.48■□□□□ 0.55
UPK3BL1-201ENST00000340457 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
UPK3BL1-201ENST00000340457 BCORQ6W2J9 1755 aa18.47■□□□□ 0.55
UPK3BL1-201ENST00000340457 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
UPK3BL1-201ENST00000340457 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
UPK3BL1-201ENST00000340457 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
UPK3BL1-201ENST00000340457 MKRN1Q9UHC7 482 aaKnown RBP18.47■□□□□ 0.55
UPK3BL1-201ENST00000340457 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
UPK3BL1-201ENST00000340457 SNRPA1P09661 255 aaKnown RBP18.45■□□□□ 0.54
UPK3BL1-201ENST00000340457 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
UPK3BL1-201ENST00000340457 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.54
UPK3BL1-201ENST00000340457 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
UPK3BL1-201ENST00000340457 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
UPK3BL1-201ENST00000340457 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
UPK3BL1-201ENST00000340457 C7orf43Q8WVR3 580 aa18.44■□□□□ 0.54
UPK3BL1-201ENST00000340457 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
UPK3BL1-201ENST00000340457 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
UPK3BL1-201ENST00000340457 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
UPK3BL1-201ENST00000340457 ZNF277Q9NRM2 450 aaPredicted RBP18.43■□□□□ 0.54
UPK3BL1-201ENST00000340457 NIP7Q9Y221 180 aaKnown RBP eCLIP18.43■□□□□ 0.54
UPK3BL1-201ENST00000340457 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
UPK3BL1-201ENST00000340457 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
UPK3BL1-201ENST00000340457 NPR1P16066 1061 aa18.42■□□□□ 0.54
UPK3BL1-201ENST00000340457 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
UPK3BL1-201ENST00000340457 CREBZFQ9NS37 354 aa18.42■□□□□ 0.54
UPK3BL1-201ENST00000340457 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
UPK3BL1-201ENST00000340457 ZNF652Q9Y2D9 606 aa18.42■□□□□ 0.54
UPK3BL1-201ENST00000340457 HLFQ16534 295 aa18.41■□□□□ 0.54
UPK3BL1-201ENST00000340457 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
UPK3BL1-201ENST00000340457 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
UPK3BL1-201ENST00000340457 EAPPQ56P03 285 aaPredicted RBP18.4■□□□□ 0.54
UPK3BL1-201ENST00000340457 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
UPK3BL1-201ENST00000340457 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
UPK3BL1-201ENST00000340457 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
UPK3BL1-201ENST00000340457 IQCA1LA6NCM1 817 aa18.39■□□□□ 0.53
UPK3BL1-201ENST00000340457 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.53
UPK3BL1-201ENST00000340457 KLRG2A4D1S0 409 aaPredicted RBP18.38■□□□□ 0.53
UPK3BL1-201ENST00000340457 LDHDQ86WU2 507 aa18.38■□□□□ 0.53
UPK3BL1-201ENST00000340457 L3MBTL3Q96JM7 780 aaPredicted RBP18.38■□□□□ 0.53
UPK3BL1-201ENST00000340457 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
UPK3BL1-201ENST00000340457 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
UPK3BL1-201ENST00000340457 PASKQ96RG2 1323 aa18.36■□□□□ 0.53
UPK3BL1-201ENST00000340457 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
UPK3BL1-201ENST00000340457 SCN4AP35499 1836 aa18.36■□□□□ 0.53
UPK3BL1-201ENST00000340457 CNTNAP1P78357 1384 aa18.35■□□□□ 0.53
UPK3BL1-201ENST00000340457 FOXN1O15353 648 aa18.35■□□□□ 0.53
UPK3BL1-201ENST00000340457 NUTM1Q86Y26 1132 aa18.35■□□□□ 0.53
UPK3BL1-201ENST00000340457 RTKN2Q8IZC4 609 aa18.35■□□□□ 0.53
UPK3BL1-201ENST00000340457 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
UPK3BL1-201ENST00000340457 HACL1Q9UJ83 578 aa18.35■□□□□ 0.53
UPK3BL1-201ENST00000340457 RNF123Q5XPI4 1314 aa18.34■□□□□ 0.53
UPK3BL1-201ENST00000340457 ITGBL1O95965 494 aaPredicted RBP18.34■□□□□ 0.53
UPK3BL1-201ENST00000340457 ABCC12Q96J65 1359 aa18.34■□□□□ 0.53
UPK3BL1-201ENST00000340457 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.53
UPK3BL1-201ENST00000340457 EPHX2P34913 555 aa18.33■□□□□ 0.53
UPK3BL1-201ENST00000340457 IARSP41252 1262 aaKnown RBP18.33■□□□□ 0.53
UPK3BL1-201ENST00000340457 VEGFBP49765 207 aa18.33■□□□□ 0.53
UPK3BL1-201ENST00000340457 SLC51AQ86UW1 340 aa18.33■□□□□ 0.53
UPK3BL1-201ENST00000340457 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
UPK3BL1-201ENST00000340457 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
UPK3BL1-201ENST00000340457 GPTP24298 496 aa18.32■□□□□ 0.52
UPK3BL1-201ENST00000340457 ALDH1B1P30837 517 aa18.32■□□□□ 0.52
UPK3BL1-201ENST00000340457 MAP1SQ66K74 1059 aaPredicted RBP18.32■□□□□ 0.52
UPK3BL1-201ENST00000340457 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
UPK3BL1-201ENST00000340457 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
UPK3BL1-201ENST00000340457 FZD9O00144 591 aa18.31■□□□□ 0.52
UPK3BL1-201ENST00000340457 TCERG1O14776 1098 aaKnown RBP18.31■□□□□ 0.52
UPK3BL1-201ENST00000340457 MYL6BP14649 208 aa18.31■□□□□ 0.52
UPK3BL1-201ENST00000340457 RGL2O15211 777 aa18.3■□□□□ 0.52
UPK3BL1-201ENST00000340457 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
UPK3BL1-201ENST00000340457 GJA3Q9Y6H8 435 aa18.3■□□□□ 0.52
UPK3BL1-201ENST00000340457 NUP98P52948 1817 aa18.3■□□□□ 0.52
UPK3BL1-201ENST00000340457 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
UPK3BL1-201ENST00000340457 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
UPK3BL1-201ENST00000340457 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
UPK3BL1-201ENST00000340457 COL4A5P29400 1685 aa18.29■□□□□ 0.52
UPK3BL1-201ENST00000340457 MAP3K15Q6ZN16 1313 aa18.29■□□□□ 0.52
UPK3BL1-201ENST00000340457 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 GPC2Q8N158 579 aa18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 RPGRQ92834 1020 aaKnown RBP18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 NYXQ9GZU5 481 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms