RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
RET-201ENST00000340058 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
RET-201ENST00000340058 KRT32Q14532 448 aa17.36■□□□□ 0.37
RET-201ENST00000340058 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
RET-201ENST00000340058 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
RET-201ENST00000340058 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
RET-201ENST00000340058 A1BGP04217 495 aa17.36■□□□□ 0.37
RET-201ENST00000340058 TPM3P06753 285 aa17.36■□□□□ 0.37
RET-201ENST00000340058 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
RET-201ENST00000340058 BICC1Q9H694 974 aaKnown RBP17.36■□□□□ 0.37
RET-201ENST00000340058 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
RET-201ENST00000340058 ZFYVE9O95405 1425 aa17.35■□□□□ 0.37
RET-201ENST00000340058 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
RET-201ENST00000340058 GJB2P29033 226 aa17.35■□□□□ 0.37
RET-201ENST00000340058 TIMM10P62072 90 aa17.35■□□□□ 0.37
RET-201ENST00000340058 BRF1Q92994 677 aa17.35■□□□□ 0.37
RET-201ENST00000340058 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
RET-201ENST00000340058 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
RET-201ENST00000340058 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
RET-201ENST00000340058 PLEKHF1Q96S99 279 aa17.35■□□□□ 0.37
RET-201ENST00000340058 NAPBQ9H115 298 aa17.35■□□□□ 0.37
RET-201ENST00000340058 AKAP2Q9Y2D5 859 aa17.35■□□□□ 0.37
RET-201ENST00000340058 PRDM15P57071 1507 aaPredicted RBP17.35■□□□□ 0.37
RET-201ENST00000340058 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
RET-201ENST00000340058 ZNF396Q96N95 335 aaPredicted RBP17.34■□□□□ 0.37
RET-201ENST00000340058 KDM5CP41229 1560 aa17.34■□□□□ 0.37
RET-201ENST00000340058 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
RET-201ENST00000340058 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
RET-201ENST00000340058 NUP62CLQ9H1M0 184 aa17.34■□□□□ 0.37
RET-201ENST00000340058 ESPNB1AK53 854 aa17.33■□□□□ 0.37
RET-201ENST00000340058 XBP1P17861 261 aa17.33■□□□□ 0.37
RET-201ENST00000340058 ZNF790Q6PG37 636 aa17.33■□□□□ 0.37
RET-201ENST00000340058 FAM89AQ96GI7 184 aa17.33■□□□□ 0.37
RET-201ENST00000340058 RBM10P98175 930 aaKnown RBP17.33■□□□□ 0.36
RET-201ENST00000340058 TSR1Q2NL82 804 aaKnown RBP17.33■□□□□ 0.36
RET-201ENST00000340058 ZNF521Q96K83 1311 aa17.33■□□□□ 0.36
RET-201ENST00000340058 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
RET-201ENST00000340058 ZPR1O75312 459 aa17.32■□□□□ 0.36
RET-201ENST00000340058 NMIQ13287 307 aaPredicted RBP17.32■□□□□ 0.36
RET-201ENST00000340058 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
RET-201ENST00000340058 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
RET-201ENST00000340058 ZNF213O14771 459 aa17.32■□□□□ 0.36
RET-201ENST00000340058 STX6O43752 255 aa17.32■□□□□ 0.36
RET-201ENST00000340058 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
RET-201ENST00000340058 CHMLP26374 656 aa17.32■□□□□ 0.36
RET-201ENST00000340058 RBM5P52756 815 aaKnown RBP eCLIP17.32■□□□□ 0.36
RET-201ENST00000340058 TFCP2Q12800 502 aa17.32■□□□□ 0.36
RET-201ENST00000340058 MICU3Q86XE3 530 aa17.32■□□□□ 0.36
RET-201ENST00000340058 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
RET-201ENST00000340058 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
RET-201ENST00000340058 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
RET-201ENST00000340058 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
RET-201ENST00000340058 POLR3DP05423 398 aaPredicted RBP17.31■□□□□ 0.36
RET-201ENST00000340058 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
RET-201ENST00000340058 BRMS1Q9HCU9 246 aa17.31■□□□□ 0.36
RET-201ENST00000340058 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
RET-201ENST00000340058 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
RET-201ENST00000340058 ZNF594Q96JF6 807 aaPredicted RBP17.31■□□□□ 0.36
RET-201ENST00000340058 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
RET-201ENST00000340058 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
RET-201ENST00000340058 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
RET-201ENST00000340058 IL2RBP14784 551 aa17.31■□□□□ 0.36
RET-201ENST00000340058 ANKIB1Q9P2G1 1089 aa17.31■□□□□ 0.36
RET-201ENST00000340058 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
RET-201ENST00000340058 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
RET-201ENST00000340058 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
RET-201ENST00000340058 TRMT2AQ8IZ69 625 aaKnown RBP17.3■□□□□ 0.36
RET-201ENST00000340058 C8orf37Q96NL8 207 aa17.3■□□□□ 0.36
RET-201ENST00000340058 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
RET-201ENST00000340058 TPM1P09493 284 aa17.29■□□□□ 0.36
RET-201ENST00000340058 USP26Q9BXU7 913 aa17.29■□□□□ 0.36
RET-201ENST00000340058 JAG2Q9Y219 1238 aa17.29■□□□□ 0.36
RET-201ENST00000340058 ZSCAN29Q8IWY8 852 aaPredicted RBP17.29■□□□□ 0.36
RET-201ENST00000340058 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
RET-201ENST00000340058 USP16Q9Y5T5 823 aa17.29■□□□□ 0.36
RET-201ENST00000340058 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
RET-201ENST00000340058 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
RET-201ENST00000340058 ISM2Q6H9L7 571 aa17.28■□□□□ 0.36
RET-201ENST00000340058 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
RET-201ENST00000340058 CCDC129Q6ZRS4 1044 aa17.28■□□□□ 0.36
RET-201ENST00000340058 ATP6V1AP38606 617 aa17.28■□□□□ 0.36
RET-201ENST00000340058 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
RET-201ENST00000340058 FAM177A1Q8N128 213 aaPredicted RBP17.28■□□□□ 0.36
RET-201ENST00000340058 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
RET-201ENST00000340058 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
RET-201ENST00000340058 NAT10Q9H0A0 1025 aaKnown RBP17.28■□□□□ 0.36
RET-201ENST00000340058 NEO1Q92859 1461 aa17.28■□□□□ 0.36
RET-201ENST00000340058 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
RET-201ENST00000340058 TRPM2O94759 1503 aa17.28■□□□□ 0.36
RET-201ENST00000340058 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
RET-201ENST00000340058 BIN1O00499 593 aa17.28■□□□□ 0.36
RET-201ENST00000340058 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
RET-201ENST00000340058 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
RET-201ENST00000340058 CCDC24Q8N4L8 307 aa17.28■□□□□ 0.36
RET-201ENST00000340058 CFAP45Q9UL16 551 aa17.28■□□□□ 0.36
RET-201ENST00000340058 CHD1O14646 1710 aa17.27■□□□□ 0.36
RET-201ENST00000340058 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
RET-201ENST00000340058 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.36
RET-201ENST00000340058 EIF4A1P60842 406 aaKnown RBP17.27■□□□□ 0.36
RET-201ENST00000340058 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms