RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 PHF14O94880 888 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 TRAPPC3LQ5T215 181 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 DZIP3Q86Y13 1208 aaKnown RBP18.73■□□□□ 0.59
CSRP1-201ENST00000340006 MAP3K2Q9Y2U5 619 aa18.73■□□□□ 0.59
CSRP1-201ENST00000340006 A0A087WZG4 1122 aa18.72■□□□□ 0.59
CSRP1-201ENST00000340006 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
CSRP1-201ENST00000340006 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
CSRP1-201ENST00000340006 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
CSRP1-201ENST00000340006 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
CSRP1-201ENST00000340006 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
CSRP1-201ENST00000340006 RGPD3A6NKT7 1758 aaPredicted RBP18.71■□□□□ 0.59
CSRP1-201ENST00000340006 RGPD4Q7Z3J3 1758 aa18.71■□□□□ 0.59
CSRP1-201ENST00000340006 RFC4P35249 363 aa18.7■□□□□ 0.58
CSRP1-201ENST00000340006 DNAAF4Q8WXU2 420 aa18.7■□□□□ 0.58
CSRP1-201ENST00000340006 MSH5O43196 834 aa18.7■□□□□ 0.58
CSRP1-201ENST00000340006 ZPR1O75312 459 aa18.7■□□□□ 0.58
CSRP1-201ENST00000340006 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
CSRP1-201ENST00000340006 NEXNQ0ZGT2 675 aa18.69■□□□□ 0.58
CSRP1-201ENST00000340006 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
CSRP1-201ENST00000340006 COL15A1P39059 1388 aa18.69■□□□□ 0.58
CSRP1-201ENST00000340006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
CSRP1-201ENST00000340006 RLBP1P12271 317 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 AKT1S1Q96B36 256 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 COG6Q9Y2V7 657 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 ZNF827Q17R98 1081 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 ITPRIPQ8IWB1 547 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 TMEM57Q8N5G2 664 aa18.68■□□□□ 0.58
CSRP1-201ENST00000340006 ADCY9O60503 1353 aa18.67■□□□□ 0.58
CSRP1-201ENST00000340006 AMIGO3Q86WK7 504 aa18.67■□□□□ 0.58
CSRP1-201ENST00000340006 MYD88Q99836 296 aa18.67■□□□□ 0.58
CSRP1-201ENST00000340006 RREB1Q92766 1687 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 SSFA2P28290 1259 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 HLFQ16534 295 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
CSRP1-201ENST00000340006 ADRA2BP18089 450 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
CSRP1-201ENST00000340006 ERICH6BQ5W0A0 696 aa18.66■□□□□ 0.58
CSRP1-201ENST00000340006 GIGYF2Q6Y7W6 1299 aaKnown RBP18.65■□□□□ 0.58
CSRP1-201ENST00000340006 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
CSRP1-201ENST00000340006 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
CSRP1-201ENST00000340006 ABCC4O15439 1325 aa18.65■□□□□ 0.58
CSRP1-201ENST00000340006 ATP5J2-PTCD1G3V325 749 aa18.64■□□□□ 0.58
CSRP1-201ENST00000340006 USPL1Q5W0Q7 1092 aa18.64■□□□□ 0.58
CSRP1-201ENST00000340006 FLAD1Q8NFF5 587 aa18.64■□□□□ 0.58
CSRP1-201ENST00000340006 CRBNQ96SW2 442 aa18.64■□□□□ 0.58
CSRP1-201ENST00000340006 ZNF652Q9Y2D9 606 aa18.64■□□□□ 0.58
CSRP1-201ENST00000340006 UBR3Q6ZT12 1888 aa18.64■□□□□ 0.57
CSRP1-201ENST00000340006 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
CSRP1-201ENST00000340006 SRP68Q9UHB9 627 aaKnown RBP18.64■□□□□ 0.57
CSRP1-201ENST00000340006 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
CSRP1-201ENST00000340006 TCIRG1Q13488 830 aa18.63■□□□□ 0.57
CSRP1-201ENST00000340006 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
CSRP1-201ENST00000340006 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
CSRP1-201ENST00000340006 BEND3Q5T5X7 828 aa18.63■□□□□ 0.57
CSRP1-201ENST00000340006 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
CSRP1-201ENST00000340006 NUP98P52948 1817 aa18.63■□□□□ 0.57
CSRP1-201ENST00000340006 CWF19L2Q2TBE0 894 aaKnown RBP18.62■□□□□ 0.57
CSRP1-201ENST00000340006 LINS1Q8NG48 757 aa18.62■□□□□ 0.57
CSRP1-201ENST00000340006 ARFGEF2Q9Y6D5 1785 aa18.62■□□□□ 0.57
CSRP1-201ENST00000340006 CLEC4GQ6UXB4 293 aa18.62■□□□□ 0.57
CSRP1-201ENST00000340006 COL23A1Q86Y22 540 aaPredicted RBP18.62■□□□□ 0.57
CSRP1-201ENST00000340006 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
CSRP1-201ENST00000340006 GPTP24298 496 aa18.61■□□□□ 0.57
CSRP1-201ENST00000340006 BICDL1Q6ZP65 573 aa18.61■□□□□ 0.57
CSRP1-201ENST00000340006 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
CSRP1-201ENST00000340006 C9orf78Q9NZ63 289 aaPredicted RBP18.61■□□□□ 0.57
CSRP1-201ENST00000340006 NUP188Q5SRE5 1749 aa18.6■□□□□ 0.57
CSRP1-201ENST00000340006 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
CSRP1-201ENST00000340006 CHMP4BQ9H444 224 aaKnown RBP18.6■□□□□ 0.57
CSRP1-201ENST00000340006 USP42Q9H9J4 1324 aaKnown RBP18.59■□□□□ 0.57
CSRP1-201ENST00000340006 NEURL1BA8MQ27 555 aa18.59■□□□□ 0.57
CSRP1-201ENST00000340006 ALDH1L1O75891 902 aa18.59■□□□□ 0.57
CSRP1-201ENST00000340006 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
CSRP1-201ENST00000340006 PNPLA7Q6ZV29 1317 aa18.59■□□□□ 0.57
CSRP1-201ENST00000340006 CWC25Q9NXE8 425 aaPredicted RBP18.59■□□□□ 0.57
CSRP1-201ENST00000340006 FAM177BA6PVY3 158 aa18.58■□□□□ 0.56
CSRP1-201ENST00000340006 ZBTB7BO15156 539 aaPredicted RBP18.58■□□□□ 0.56
CSRP1-201ENST00000340006 CCDC191Q8NCU4 936 aa18.58■□□□□ 0.56
CSRP1-201ENST00000340006 SETDB2Q96T68 719 aa18.58■□□□□ 0.56
CSRP1-201ENST00000340006 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.56
CSRP1-201ENST00000340006 GCKRQ14397 625 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 ISCA1Q9BUE6 129 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 GYS1P13807 737 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 RTL5Q5HYW3 569 aaPredicted RBP18.57■□□□□ 0.56
CSRP1-201ENST00000340006 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 ZNF34Q8IZ26 560 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 PXDNLA1KZ92 1463 aa18.57■□□□□ 0.56
CSRP1-201ENST00000340006 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
CSRP1-201ENST00000340006 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
CSRP1-201ENST00000340006 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
CSRP1-201ENST00000340006 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
CSRP1-201ENST00000340006 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
CSRP1-201ENST00000340006 GNAI3P08754 354 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 JARID2Q92833 1246 aaPredicted RBP18.55■□□□□ 0.56
CSRP1-201ENST00000340006 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms