RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.28
PCDH8-201ENST00000338862 LGR6Q9HBX8 967 aa16.77■□□□□ 0.28
PCDH8-201ENST00000338862 CHD1O14646 1710 aa16.77■□□□□ 0.28
PCDH8-201ENST00000338862 EFCAB6Q5THR3 1501 aa16.77■□□□□ 0.28
PCDH8-201ENST00000338862 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.27
PCDH8-201ENST00000338862 TYRO3Q06418 890 aa16.77■□□□□ 0.27
PCDH8-201ENST00000338862 HOMER1Q86YM7 354 aa16.77■□□□□ 0.27
PCDH8-201ENST00000338862 EID1Q9Y6B2 187 aa16.77■□□□□ 0.27
PCDH8-201ENST00000338862 IBTKQ9P2D0 1353 aaPredicted RBP16.76■□□□□ 0.27
PCDH8-201ENST00000338862 ME1P48163 572 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 PIK3R4Q99570 1358 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 BIN1O00499 593 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 CDK11BP21127 795 aaKnown RBP16.76■□□□□ 0.27
PCDH8-201ENST00000338862 ME3Q16798 604 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
PCDH8-201ENST00000338862 CUL4AQ13619 759 aa16.75■□□□□ 0.27
PCDH8-201ENST00000338862 SMC2O95347 1197 aa16.75■□□□□ 0.27
PCDH8-201ENST00000338862 LRRC59Q96AG4 307 aaKnown RBP16.75■□□□□ 0.27
PCDH8-201ENST00000338862 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
PCDH8-201ENST00000338862 TMX1Q9H3N1 280 aa16.75■□□□□ 0.27
PCDH8-201ENST00000338862 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
PCDH8-201ENST00000338862 GLI2P10070 1586 aa16.75■□□□□ 0.27
PCDH8-201ENST00000338862 YEATS2Q9ULM3 1422 aa16.75■□□□□ 0.27
PCDH8-201ENST00000338862 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
PCDH8-201ENST00000338862 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
PCDH8-201ENST00000338862 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
PCDH8-201ENST00000338862 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 PRIMPOLQ96LW4 560 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 CGNQ9P2M7 1197 aaKnown RBP16.74■□□□□ 0.27
PCDH8-201ENST00000338862 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 JAK2O60674 1132 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 PSMA5P28066 241 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 METP08581 1390 aa16.74■□□□□ 0.27
PCDH8-201ENST00000338862 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
PCDH8-201ENST00000338862 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
PCDH8-201ENST00000338862 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
PCDH8-201ENST00000338862 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
PCDH8-201ENST00000338862 PSME1Q06323 249 aa16.73■□□□□ 0.27
PCDH8-201ENST00000338862 RAD50Q92878 1312 aa16.73■□□□□ 0.27
PCDH8-201ENST00000338862 PDCP20941 246 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 AMOTL2Q9Y2J4 779 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 HSP90AA4PQ58FG1 418 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
PCDH8-201ENST00000338862 TPCN1Q9ULQ1 816 aa16.72■□□□□ 0.27
PCDH8-201ENST00000338862 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
PCDH8-201ENST00000338862 KINO60870 393 aaKnown RBP16.71■□□□□ 0.27
PCDH8-201ENST00000338862 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
PCDH8-201ENST00000338862 BRF1Q92994 677 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
PCDH8-201ENST00000338862 OSBPL3Q9H4L5 887 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
PCDH8-201ENST00000338862 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
PCDH8-201ENST00000338862 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
PCDH8-201ENST00000338862 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
PCDH8-201ENST00000338862 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
PCDH8-201ENST00000338862 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
PCDH8-201ENST00000338862 CFAP74Q9C0B2 1584 aa16.7■□□□□ 0.26
PCDH8-201ENST00000338862 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
PCDH8-201ENST00000338862 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDH8-201ENST00000338862 ARID5BQ14865 1188 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 LSG1Q9H089 658 aaKnown RBP16.69■□□□□ 0.26
PCDH8-201ENST00000338862 MED14O60244 1454 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 TERF1P54274 439 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 NR1I2O75469 434 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
PCDH8-201ENST00000338862 VIRMAQ69YN4 1812 aaKnown RBP16.68■□□□□ 0.26
PCDH8-201ENST00000338862 POLR3DP05423 398 aaPredicted RBP16.68■□□□□ 0.26
PCDH8-201ENST00000338862 SH2B1Q9NRF2 756 aaPredicted RBP16.68■□□□□ 0.26
PCDH8-201ENST00000338862 ABCC3O15438 1527 aa16.68■□□□□ 0.26
PCDH8-201ENST00000338862 CHGBP05060 677 aa16.68■□□□□ 0.26
PCDH8-201ENST00000338862 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
PCDH8-201ENST00000338862 AP5Z1O43299 807 aa16.68■□□□□ 0.26
PCDH8-201ENST00000338862 NRDCO43847 1150 aa16.68■□□□□ 0.26
PCDH8-201ENST00000338862 ADGRB3O60242 1522 aa16.68■□□□□ 0.26
PCDH8-201ENST00000338862 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
PCDH8-201ENST00000338862 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
PCDH8-201ENST00000338862 HAND2P61296 217 aa16.67■□□□□ 0.26
PCDH8-201ENST00000338862 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
PCDH8-201ENST00000338862 SCAND2PQ9GZW5 306 aaPredicted RBP16.67■□□□□ 0.26
PCDH8-201ENST00000338862 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
PCDH8-201ENST00000338862 MYD88Q99836 296 aa16.67■□□□□ 0.26
PCDH8-201ENST00000338862 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
PCDH8-201ENST00000338862 RGS12O14924 1447 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms