RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 SPATA24Q86W54 205 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
SHANK2-201ENST00000338508 CALML4Q96GE6 196 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 GAPVD1Q14C86 1478 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 HAND2P61296 217 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 CCDC160A6NGH7 325 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-201ENST00000338508 CLIP2Q9UDT6 1046 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 AAMPQ13685 434 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 FERMT1Q9BQL6 677 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 ZSCAN12O43309 604 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 ACTN2P35609 894 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 HSP90AA4PQ58FG1 418 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
SHANK2-201ENST00000338508 PHACTR2O75167 634 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 CCDC63Q8NA47 563 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 A0A087WZG4 1122 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 UTP14AQ9BVJ6 771 aaKnown RBP13.56□□□□□ -0.24
SHANK2-201ENST00000338508 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 NDC80O14777 642 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 MVPQ14764 893 aaKnown RBP13.56□□□□□ -0.24
SHANK2-201ENST00000338508 GBP3Q9H0R5 595 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 AKNAQ7Z591 1439 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 PROCA1Q8NCQ7 364 aaPredicted RBP13.56□□□□□ -0.24
SHANK2-201ENST00000338508 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 YEATS4O95619 227 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 ANO10Q9NW15 660 aa13.56□□□□□ -0.24
SHANK2-201ENST00000338508 CCDC196A0A1B0GTZ2 297 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 NBPF1Q3BBV0 1214 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-201ENST00000338508 PKNOX2Q96KN3 472 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
SHANK2-201ENST00000338508 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 CFAP58Q5T655 872 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 TMEM57Q8N5G2 664 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 C16orf45Q96MC5 204 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-201ENST00000338508 DUSP27Q5VZP5 1158 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 CABP5Q9NP86 173 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 RBM26Q5T8P6 1007 aaKnown RBP13.55□□□□□ -0.24
SHANK2-201ENST00000338508 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
SHANK2-201ENST00000338508 F6X3S4 739 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 KAT14Q9H8E8 782 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 TCP11L1Q9NUJ3 509 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-201ENST00000338508 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 ALS2CR12Q96Q35 445 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 TMEM67Q5HYA8 995 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 STX6O43752 255 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 TAF12Q16514 161 aa13.54□□□□□ -0.24
SHANK2-201ENST00000338508 MICU3Q86XE3 530 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 SLF2Q8IX21 1173 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 PICALMQ13492 652 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 ARID5AQ03989 594 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 BIN2Q9UBW5 565 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-201ENST00000338508 GOLIM4O00461 696 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
SHANK2-201ENST00000338508 RAB11FIP3O75154 756 aa13.52□□□□□ -0.24
SHANK2-201ENST00000338508 RFC4P35249 363 aa13.52□□□□□ -0.24
SHANK2-201ENST00000338508 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.247e-7■■■■■ 30.9
SHANK2-201ENST00000338508 GSTA5Q7RTV2 222 aa13.52□□□□□ -0.24
SHANK2-201ENST00000338508 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.24
SHANK2-201ENST00000338508 TAF7Q15545 349 aaPredicted RBP13.52□□□□□ -0.24
SHANK2-201ENST00000338508 STX8Q9UNK0 236 aa13.52□□□□□ -0.24
SHANK2-201ENST00000338508 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.24
SHANK2-201ENST00000338508 ATP5J2-PTCD1G3V325 749 aa13.52□□□□□ -0.25
SHANK2-201ENST00000338508 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.25
SHANK2-201ENST00000338508 IQSEC3Q9UPP2 1182 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-201ENST00000338508 C6orf163Q5TEZ5 329 aa13.52□□□□□ -0.25
SHANK2-201ENST00000338508 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.25
SHANK2-201ENST00000338508 CFAP57Q96MR6 1250 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 SP4Q02446 784 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 IQCGQ9H095 443 aaKnown RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 PHAXQ9H814 394 aaKnown RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 EEF2P13639 858 aaKnown RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 MX1P20591 662 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 MCM3P25205 808 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 AFMP43652 599 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 CCDC6Q16204 474 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 HLA-DOAP06340 250 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 KIAA0753Q2KHM9 967 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 TBC1D5Q92609 795 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 SMARCC1Q92922 1105 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-201ENST00000338508 AMPD3Q01432 767 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 TCHPQ9BT92 498 aa13.51□□□□□ -0.25
SHANK2-201ENST00000338508 SMIM23A6NLE4 172 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms