RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NCBP1Q09161 790 aaKnown RBP18.68■□□□□ 0.58
NPHP3-201ENST00000337331 ANO6Q4KMQ2 910 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 MICALL1Q8N3F8 863 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 ZSWIM4Q9H7M6 989 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 MCM6Q14566 821 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 ANKLE2Q86XL3 938 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 KIAA1524Q8TCG1 905 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
NPHP3-201ENST00000337331 LOC102724159A0A0B4J2E5 919 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 PWP2Q15269 919 aaKnown RBP18.67■□□□□ 0.58
NPHP3-201ENST00000337331 DDX41Q9UJV9 622 aaKnown RBP18.67■□□□□ 0.58
NPHP3-201ENST00000337331 STX6O43752 255 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 TXLNAP40222 546 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 TFIP11Q9UBB9 837 aaKnown RBP18.67■□□□□ 0.58
NPHP3-201ENST00000337331 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 ZMYM4Q5VZL5 1548 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 IL16Q14005 1332 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 NSD2O96028 1365 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 CCP110O43303 1012 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 CAGE1Q8TC20 777 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 CCDC91Q7Z6B0 441 aa18.67■□□□□ 0.58
NPHP3-201ENST00000337331 C16orf71Q8IYS4 520 aaPredicted RBP18.67■□□□□ 0.58
NPHP3-201ENST00000337331 DNAI1Q9UI46 699 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 PTCD1O75127 700 aaKnown RBP18.66■□□□□ 0.58
NPHP3-201ENST00000337331 ERLIN1O75477 346 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 LARP1Q6PKG0 1096 aaKnown RBP18.66■□□□□ 0.58
NPHP3-201ENST00000337331 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.66■□□□□ 0.58
NPHP3-201ENST00000337331 PTPRCP08575 1304 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 NEMFO60524 1076 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
NPHP3-201ENST00000337331 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 SMARCE1Q969G3 411 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 ARFGAP3Q9NP61 516 aa18.66■□□□□ 0.58
NPHP3-201ENST00000337331 FAM193AP78312 1265 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 ATP10BO94823 1461 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 IVLP07476 585 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 SDSP20132 328 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 KCNH5Q8NCM2 988 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 USP26Q9BXU7 913 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 SCAND2PQ9GZW5 306 aaPredicted RBP18.65■□□□□ 0.58
NPHP3-201ENST00000337331 CCDC69A6NI79 296 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 SYT10Q6XYQ8 523 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 EFCC1Q9HA90 598 aa18.65■□□□□ 0.58
NPHP3-201ENST00000337331 SH2B1Q9NRF2 756 aaPredicted RBP18.65■□□□□ 0.58
NPHP3-201ENST00000337331 RAPGEF6Q8TEU7 1601 aa18.64■□□□□ 0.58
NPHP3-201ENST00000337331 ERCC4Q92889 916 aaPredicted RBP18.64■□□□□ 0.57
NPHP3-201ENST00000337331 MEIS3Q99687 375 aa18.64■□□□□ 0.57
NPHP3-201ENST00000337331 KIAA0754O94854 1291 aa18.64■□□□□ 0.57
NPHP3-201ENST00000337331 ERCC6LQ2NKX8 1250 aa18.64■□□□□ 0.57
NPHP3-201ENST00000337331 CCDC43Q96MW1 224 aaKnown RBP18.64■□□□□ 0.57
NPHP3-201ENST00000337331 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
NPHP3-201ENST00000337331 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
NPHP3-201ENST00000337331 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
NPHP3-201ENST00000337331 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 CASQ1P31415 396 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 EPS15P42566 896 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 PPFIBP1Q86W92 1011 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 CTDP1Q9Y5B0 961 aaPredicted RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 BLMP54132 1417 aaPredicted RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 PHACTR2O75167 634 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 SLC3A2P08195 630 aaKnown RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 DNM1Q05193 864 aaKnown RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 TYRO3Q06418 890 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 E2F4Q16254 413 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 GNL3LQ9NVN8 582 aaKnown RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
NPHP3-201ENST00000337331 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
NPHP3-201ENST00000337331 CDKL5O76039 1030 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 ZSCAN22P10073 491 aaPredicted RBP18.62■□□□□ 0.57
NPHP3-201ENST00000337331 RAD51AP2Q09MP3 1159 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 MYD88Q99836 296 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 ZBTB40Q9NUA8 1239 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 VPS18Q9P253 973 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 FOXO3O43524 673 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 ECHDC1Q9NTX5 307 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 AMOTL2Q9Y2J4 779 aa18.62■□□□□ 0.57
NPHP3-201ENST00000337331 MAGEC2Q9UBF1 373 aaPredicted RBP18.62■□□□□ 0.57
NPHP3-201ENST00000337331 PIP4K2AP48426 406 aaPredicted RBP18.61■□□□□ 0.57
NPHP3-201ENST00000337331 IMMTQ16891 758 aaKnown RBP18.61■□□□□ 0.57
NPHP3-201ENST00000337331 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 GUCY1B3Q02153 619 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 DTNBO60941 627 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 ANXA1P04083 346 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 CDR1P51861 262 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 IKQ13123 557 aaPredicted RBP18.61■□□□□ 0.57
NPHP3-201ENST00000337331 DHX8Q14562 1220 aaKnown RBP18.61■□□□□ 0.57
NPHP3-201ENST00000337331 JAKMIP3Q5VZ66 844 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 ANKRD36BQ8N2N9 1353 aa18.61■□□□□ 0.57
NPHP3-201ENST00000337331 DACT1Q9NYF0 836 aa18.6■□□□□ 0.57
NPHP3-201ENST00000337331 HSP90AB2PQ58FF8 381 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms