RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 HSP90AA4PQ58FG1 418 aa9.8□□□□□ -0.84
HPS4-201ENST00000336873 PUS7Q96PZ0 661 aaKnown RBP9.8□□□□□ -0.84
HPS4-201ENST00000336873 IL25Q9H293 177 aa9.8□□□□□ -0.84
HPS4-201ENST00000336873 BICC1Q9H694 974 aaKnown RBP9.8□□□□□ -0.84
HPS4-201ENST00000336873 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
HPS4-201ENST00000336873 MYO3AQ8NEV4 1616 aa9.8□□□□□ -0.84
HPS4-201ENST00000336873 INO80Q9ULG1 1556 aaPredicted RBP9.8□□□□□ -0.84
HPS4-201ENST00000336873 SYT1P21579 422 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 PTH1RQ03431 593 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 ADCK5Q3MIX3 580 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 SASS6Q6UVJ0 657 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 SEC62Q99442 399 aaKnown RBP9.79□□□□□ -0.84
HPS4-201ENST00000336873 RBM8AQ9Y5S9 174 aaKnown RBP9.79□□□□□ -0.84
HPS4-201ENST00000336873 EFCAB6Q5THR3 1501 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 CDK11BP21127 795 aaKnown RBP9.79□□□□□ -0.84
HPS4-201ENST00000336873 SPATA32Q96LK8 384 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 ADCY5O95622 1261 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 GTF2E1P29083 439 aaPredicted RBP9.79□□□□□ -0.84
HPS4-201ENST00000336873 CLCN1P35523 988 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 DDIT3P35638 169 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 ME1P48163 572 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 MCM2P49736 904 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 NMIQ13287 307 aaPredicted RBP9.79□□□□□ -0.84
HPS4-201ENST00000336873 SLC4A8Q2Y0W8 1093 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 KRT28Q7Z3Y7 464 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 TET3O43151 1660 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 MAP3K4Q9Y6R4 1608 aa9.79□□□□□ -0.84
HPS4-201ENST00000336873 PPRC1Q5VV67 1664 aaKnown RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 BIN1O00499 593 aa9.78□□□□□ -0.84
HPS4-201ENST00000336873 IGSF3O75054 1194 aa9.78□□□□□ -0.84
HPS4-201ENST00000336873 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 HSPA2P54652 639 aa9.78□□□□□ -0.84
HPS4-201ENST00000336873 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 FAM177A1Q8N128 213 aaPredicted RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 BRF1Q92994 677 aa9.78□□□□□ -0.84
HPS4-201ENST00000336873 AEBP2Q6ZN18 517 aaPredicted RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 CCAR2Q8N163 923 aaKnown RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 ZNF594Q96JF6 807 aaPredicted RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 TLR7Q9NYK1 1049 aaKnown RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 FLT4P35916 1363 aa9.78□□□□□ -0.84
HPS4-201ENST00000336873 IQSEC3Q9UPP2 1182 aaPredicted RBP9.78□□□□□ -0.84
HPS4-201ENST00000336873 RXRAP19793 462 aa9.77□□□□□ -0.84
HPS4-201ENST00000336873 KRT85P78386 507 aa9.77□□□□□ -0.84
HPS4-201ENST00000336873 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.84
HPS4-201ENST00000336873 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.84
HPS4-201ENST00000336873 IDH1O75874 414 aaKnown RBP9.77□□□□□ -0.85
HPS4-201ENST00000336873 CCDC39Q9UFE4 941 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 USP16Q9Y5T5 823 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 EDC4Q6P2E9 1401 aaKnown RBP9.77□□□□□ -0.85
HPS4-201ENST00000336873 KIF1BO60333 1816 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 SNX14Q9Y5W7 946 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 RIMBP3CA6NJZ7 1639 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 RIMBP3BA6NNM3 1639 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 RIMBP3Q9UFD9 1639 aa9.77□□□□□ -0.85
HPS4-201ENST00000336873 GRM8O00222 908 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 OTUD7BQ6GQQ9 843 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 TRMT1Q9NXH9 659 aaKnown RBP9.76□□□□□ -0.85
HPS4-201ENST00000336873 ADGRB2O60241 1585 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 MYOM2P54296 1465 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 PES1O00541 588 aaKnown RBP9.76□□□□□ -0.85
HPS4-201ENST00000336873 LARGE1O95461 756 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 PSMA5P28066 241 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 VWDEQ8N2E2 1590 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 SUCLG2Q96I99 432 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 C16orf45Q96MC5 204 aaPredicted RBP9.76□□□□□ -0.85
HPS4-201ENST00000336873 TULP4Q9NRJ4 1543 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 TMEM2Q9UHN6 1383 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 KNDC1Q76NI1 1749 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 NCOA3Q9Y6Q9 1424 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 RRP9O43818 475 aaKnown RBP9.76□□□□□ -0.85
HPS4-201ENST00000336873 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
HPS4-201ENST00000336873 NCOA5Q9HCD5 579 aaKnown RBP9.76□□□□□ -0.85
HPS4-201ENST00000336873 TBX22Q9Y458 520 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 PIK3R4Q99570 1358 aa9.76□□□□□ -0.85
HPS4-201ENST00000336873 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
HPS4-201ENST00000336873 EAF2Q96CJ1 260 aaPredicted RBP9.75□□□□□ -0.85
HPS4-201ENST00000336873 NUP62CLQ9H1M0 184 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 DACT1Q9NYF0 836 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 ZSCAN22P10073 491 aaPredicted RBP9.75□□□□□ -0.85
HPS4-201ENST00000336873 TFCP2Q12800 502 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 LUZP1Q86V48 1076 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 TMX1Q9H3N1 280 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 JAK2O60674 1132 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 CNNM1Q9NRU3 951 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
HPS4-201ENST00000336873 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 A1BGP04217 495 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 EIF4A1P60842 406 aaKnown RBP9.74□□□□□ -0.85
HPS4-201ENST00000336873 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 CCDC73Q6ZRK6 1079 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 ZNF496Q96IT1 587 aaPredicted RBP9.74□□□□□ -0.85
HPS4-201ENST00000336873 DBNDD2Q9BQY9 259 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms