RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SIL1Q9H173 461 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 DYNC1I1O14576 645 aa19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 ESCO1Q5FWF5 840 aa19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 ZNF771Q7L3S4 317 aaPredicted RBP19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 THEMISQ8N1K5 641 aaPredicted RBP19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 AGLP35573 1532 aa19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 STX6O43752 255 aa19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 ITSN1Q15811 1721 aa19.77■□□□□ 0.76
CDC42EP4-201ENST00000335793 GLRX3O76003 335 aaKnown RBP19.77■□□□□ 0.75
CDC42EP4-201ENST00000335793 AACSQ86V21 672 aa19.77■□□□□ 0.75
CDC42EP4-201ENST00000335793 KIAA2012Q0VF49 1180 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 ATP2B3Q16720 1220 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 NBPF6Q5VWK0 638 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 NBPF4Q96M43 638 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 ZKSCAN1P17029 563 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 SYT1P21579 422 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 PDRG1Q9NUG6 133 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 ATP6V1DQ9Y5K8 247 aa19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 CEP170BQ9Y4F5 1589 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP4-201ENST00000335793 KDRP35968 1356 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 HCLS1P14317 486 aaPredicted RBP19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 HS1BP3Q53T59 392 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 MTERF4Q7Z6M4 381 aaKnown RBP19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 ZBTB9Q96C00 473 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 MAP3K2Q9Y2U5 619 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 CWF19L2Q2TBE0 894 aaKnown RBP19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 RAD50Q92878 1312 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 ZSCAN22P10073 491 aaPredicted RBP19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 FERMT3Q86UX7 667 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 PI4K2BQ8TCG2 481 aa19.75■□□□□ 0.75
CDC42EP4-201ENST00000335793 PLEKHG1Q9ULL1 1385 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 NECAB1Q8N987 351 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 PDLIM2Q96JY6 352 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 PHF8Q9UPP1 1060 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 CCDC9Q9Y3X0 531 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 SETD1BQ9UPS6 1966 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 G3BP1Q13283 466 aaKnown RBP eCLIP19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 C3P01024 1663 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 NRXN3Q9Y4C0 1643 aa19.74■□□□□ 0.75
CDC42EP4-201ENST00000335793 GJB2P29033 226 aa19.73■□□□□ 0.75
CDC42EP4-201ENST00000335793 CSPP1Q1MSJ5 1256 aa19.73■□□□□ 0.75
CDC42EP4-201ENST00000335793 MON2Q7Z3U7 1717 aa19.73■□□□□ 0.75
CDC42EP4-201ENST00000335793 GOLGA6L4A6NEF3 574 aa19.73■□□□□ 0.75
CDC42EP4-201ENST00000335793 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
CDC42EP4-201ENST00000335793 PTPRUQ92729 1446 aa19.73■□□□□ 0.75
CDC42EP4-201ENST00000335793 PLEKHO1Q53GL0 409 aaPredicted RBP19.72■□□□□ 0.75
CDC42EP4-201ENST00000335793 BEND3Q5T5X7 828 aa19.72■□□□□ 0.75
CDC42EP4-201ENST00000335793 GIMAP6Q6P9H5 292 aa19.72■□□□□ 0.75
CDC42EP4-201ENST00000335793 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
CDC42EP4-201ENST00000335793 ECHDC1Q9NTX5 307 aa19.72■□□□□ 0.75
CDC42EP4-201ENST00000335793 RIMS1Q86UR5 1692 aaKnown RBP19.72■□□□□ 0.75
CDC42EP4-201ENST00000335793 PTH1RQ03431 593 aa19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 DNM1Q05193 864 aaKnown RBP19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 CCDC183Q5T5S1 534 aa19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 LSG1Q9H089 658 aaKnown RBP19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 DBF4Q9UBU7 674 aaPredicted RBP19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 TRERF1Q96PN7 1200 aa19.71■□□□□ 0.75
CDC42EP4-201ENST00000335793 HSPA2P54652 639 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 ADCK5Q3MIX3 580 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 FSD1Q9BTV5 496 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 AOX1Q06278 1338 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 STK3Q13188 491 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 SSH2Q76I76 1423 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 LARGE1O95461 756 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 F13A1P00488 732 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 POLA2Q14181 598 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 SASS6Q6UVJ0 657 aa19.7■□□□□ 0.74
CDC42EP4-201ENST00000335793 KIF20AO95235 890 aa19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 ADCY5O95622 1261 aa19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 MYL6BP14649 208 aa19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 LARP1BQ659C4 914 aaKnown RBP19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 RIC3Q7Z5B4 369 aa19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 TTC12Q9H892 705 aaPredicted RBP19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 SETD1AO15047 1707 aaKnown RBP19.69■□□□□ 0.74
CDC42EP4-201ENST00000335793 UBE2HP62256 183 aa19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 ZNF500O60304 480 aaPredicted RBP19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 PROSER3Q2NL68 480 aa19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 IP6K1Q92551 441 aa19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 SPC24Q8NBT2 197 aa19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 BABAM1Q9NWV8 329 aa19.68■□□□□ 0.74
CDC42EP4-201ENST00000335793 LETM1O95202 739 aaPredicted RBP19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 TERF1P54274 439 aa19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 FAM173BQ6P4H8 233 aa19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 FAM227BQ96M60 508 aa19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 KLHDC4Q8TBB5 520 aa19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 GTPBP4Q9BZE4 634 aaKnown RBP19.67■□□□□ 0.74
CDC42EP4-201ENST00000335793 CAMK4Q16566 473 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms