RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IFFO1Q0D2I5 559 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 KRR1Q13601 381 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 YY1AP1Q9H869 796 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 CHMP5Q9NZZ3 219 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 LZICQ8WZA0 190 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 NUF2Q9BZD4 464 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 FSD2A1L4K1 749 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC69A6NI79 296 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 MAFGO15525 162 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 GLE1Q53GS7 698 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 TXNDC9O14530 226 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 PSMC4P43686 418 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 ZNF354CQ86Y25 554 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 C6orf203Q9P0P8 240 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 MYH9P35579 1960 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 ESYT2A0FGR8 921 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 DAB2P98082 770 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 LONRF3Q496Y0 759 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 ENAHQ8N8S7 591 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 TRIM11Q96F44 468 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 ZFP91Q96JP5 570 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 MRS2Q9HD23 443 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 HOMER2Q9NSB8 354 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 FGD5Q6ZNL6 1462 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 PABPN1LA6NDY0 278 aaKnown RBP6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 E9PMD0 336 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 INAQ16352 499 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 KIF18AQ8NI77 898 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 CHMP6Q96FZ7 201 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC160A6NGH7 325 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 RANBP1P43487 201 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 KRT4P19013 534 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 AMOTQ4VCS5 1084 aa6.96□□□□□ -1.29
CDC42BPA-201ENST00000334218 STX12Q86Y82 276 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 TEKT2Q9UIF3 430 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 MLECQ14165 292 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 NBPF20Q3BBV1 942 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 MAP3K21Q5TCX8 1036 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 MAATS1Q7Z4T9 603 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 DNAJC17Q9NVM6 304 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 PHLDB1Q86UU1 1377 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 VPS37CA5D8V6 355 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 YY1P25490 414 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 API5Q9BZZ5 524 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 CREB3O43889 395 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 SCLT1Q96NL6 688 aa6.96□□□□□ -1.3
CDC42BPA-201ENST00000334218 CHCHD4Q8N4Q1 142 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRIM6Q9C030 488 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 ATN1P54259 1190 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 CEP57L1Q8IYX8 460 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.95□□□□□ -1.32e-6■■■■■ 54.4
CDC42BPA-201ENST00000334218 CHIC2Q9UKJ5 165 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 GGT6Q6P531 493 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 GDAP1L1Q96MZ0 367 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 FOSL1P15407 271 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 MAP3K9P80192 1104 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 OTUD6BQ8N6M0 293 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 VEZTQ9HBM0 779 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 ARHGEF9O43307 516 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 LMNAP02545 664 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 LONP1P36776 959 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRAF1Q13077 416 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 IL27Q8NEV9 243 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 TSC1Q92574 1164 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 HS1BP3Q53T59 392 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 TTC16Q8NEE8 873 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 CGNL1Q0VF96 1302 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 EIF2S2P20042 333 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC57Q2TAC2 916 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 TMCO5AQ8N6Q1 288 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 RRP7AQ9Y3A4 280 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 BSDC1Q9NW68 430 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 RWDD3Q9Y3V2 267 aa6.95□□□□□ -1.3
CDC42BPA-201ENST00000334218 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 URI1O94763 535 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC25Q86WR0 208 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 IFT81Q8WYA0 676 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 WBP11Q9Y2W2 641 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 BIRC3Q13489 604 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 TUBA4AP68366 448 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 FAPQ12884 760 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 FNBP4Q8N3X1 1017 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 MYO18AQ92614 2054 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 UBAC1Q9BSL1 405 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 MAK16Q9BXY0 300 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 CWC25Q9NXE8 425 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 BCAP29Q9UHQ4 241 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC102BQ68D86 513 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 GOLGA8BA8MQT2 603 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 LRRFIP1Q32MZ4 808 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 ZNF280DQ6N043 979 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms