RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RC3H1Q5TC82 1133 aaKnown RBP21.06■□□□□ 0.96
SHOX-201ENST00000334060 ZKSCAN2Q63HK3 967 aa21.06■□□□□ 0.96
SHOX-201ENST00000334060 DZIP3Q86Y13 1208 aaKnown RBP21.06■□□□□ 0.96
SHOX-201ENST00000334060 BCL2L12Q9HB09 334 aa21.06■□□□□ 0.96
SHOX-201ENST00000334060 KIF16BQ96L93 1317 aa21.06■□□□□ 0.96
SHOX-201ENST00000334060 TMEM57Q8N5G2 664 aa21.06■□□□□ 0.96
SHOX-201ENST00000334060 ARFGEF2Q9Y6D5 1785 aa21.06■□□□□ 0.96
SHOX-201ENST00000334060 ATP5J2-PTCD1G3V325 749 aa21.05■□□□□ 0.96
SHOX-201ENST00000334060 CWF19L2Q2TBE0 894 aaKnown RBP21.05■□□□□ 0.96
SHOX-201ENST00000334060 TFCP2L1Q9NZI6 479 aa21.05■□□□□ 0.96
SHOX-201ENST00000334060 COG6Q9Y2V7 657 aa21.05■□□□□ 0.96
SHOX-201ENST00000334060 RTCBQ9Y3I0 505 aaKnown RBP21.05■□□□□ 0.96
SHOX-201ENST00000334060 PNPLA7Q6ZV29 1317 aa21.05■□□□□ 0.96
SHOX-201ENST00000334060 CAMTA2O94983 1202 aa21.05■□□□□ 0.96
SHOX-201ENST00000334060 ANKRD13DQ6ZTN6 518 aa21.05■□□□□ 0.96
SHOX-201ENST00000334060 COL23A1Q86Y22 540 aaPredicted RBP21.05■□□□□ 0.96
SHOX-201ENST00000334060 JARID2Q92833 1246 aaPredicted RBP21.05■□□□□ 0.96
SHOX-201ENST00000334060 USPL1Q5W0Q7 1092 aa21.04■□□□□ 0.96
SHOX-201ENST00000334060 ABCC4O15439 1325 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 CCDC125Q86Z20 511 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 IGKV5-2P06315 115 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 CRBNQ96SW2 442 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 MYD88Q99836 296 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 CACNA1FO60840 1977 aa21.03■□□□□ 0.96
SHOX-201ENST00000334060 GPTP24298 496 aa21.02■□□□□ 0.96
SHOX-201ENST00000334060 DNAAF4Q8WXU2 420 aa21.02■□□□□ 0.96
SHOX-201ENST00000334060 PTPRCP08575 1304 aa21.02■□□□□ 0.95
SHOX-201ENST00000334060 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.95
SHOX-201ENST00000334060 DZIP1LQ8IYY4 767 aaKnown RBP21.01■□□□□ 0.95
SHOX-201ENST00000334060 PLBD2Q8NHP8 589 aa21.01■□□□□ 0.95
SHOX-201ENST00000334060 BCORQ6W2J9 1755 aa21■□□□□ 0.95
SHOX-201ENST00000334060 BEND3Q5T5X7 828 aa21■□□□□ 0.95
SHOX-201ENST00000334060 EXOC6Q8TAG9 804 aa21■□□□□ 0.95
SHOX-201ENST00000334060 UBN2Q6ZU65 1347 aa21■□□□□ 0.95
SHOX-201ENST00000334060 FKBP8Q14318 412 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 TRAPPC3LQ5T215 181 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 MSL1Q68DK7 614 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 GOLGB1Q14789 3259 aaKnown RBP20.99■□□□□ 0.95
SHOX-201ENST00000334060 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 PSDA5PKW4 1024 aaPredicted RBP20.99■□□□□ 0.95
SHOX-201ENST00000334060 RTL5Q5HYW3 569 aaPredicted RBP20.99■□□□□ 0.95
SHOX-201ENST00000334060 BICDL1Q6ZP65 573 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 SYNE4Q8N205 404 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 ARHGAP45Q92619 1136 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 NUP98P52948 1817 aa20.99■□□□□ 0.95
SHOX-201ENST00000334060 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
SHOX-201ENST00000334060 FAM177BA6PVY3 158 aa20.98■□□□□ 0.95
SHOX-201ENST00000334060 MSH5O43196 834 aa20.98■□□□□ 0.95
SHOX-201ENST00000334060 KIF6Q6ZMV9 814 aa20.98■□□□□ 0.95
SHOX-201ENST00000334060 FTSJ3Q8IY81 847 aaKnown RBP20.98■□□□□ 0.95
SHOX-201ENST00000334060 TBC1D9BQ66K14 1250 aa20.97■□□□□ 0.95
SHOX-201ENST00000334060 ITPRIPQ8IWB1 547 aa20.97■□□□□ 0.95
SHOX-201ENST00000334060 METTL22Q9BUU2 404 aaPredicted RBP20.97■□□□□ 0.95
SHOX-201ENST00000334060 API5Q9BZZ5 524 aaKnown RBP20.97■□□□□ 0.95
SHOX-201ENST00000334060 R3HDM1Q15032 1099 aaKnown RBP20.97■□□□□ 0.95
SHOX-201ENST00000334060 STK32BQ9NY57 414 aa20.97■□□□□ 0.95
SHOX-201ENST00000334060 NARFQ9UHQ1 456 aa20.97■□□□□ 0.95
SHOX-201ENST00000334060 IPO8O15397 1037 aaKnown RBP20.96■□□□□ 0.95
SHOX-201ENST00000334060 GYS1P13807 737 aa20.96■□□□□ 0.95
SHOX-201ENST00000334060 SSFA2P28290 1259 aa20.96■□□□□ 0.95
SHOX-201ENST00000334060 RFC4P35249 363 aa20.96■□□□□ 0.95
SHOX-201ENST00000334060 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
SHOX-201ENST00000334060 CCDC24Q8N4L8 307 aa20.96■□□□□ 0.95
SHOX-201ENST00000334060 MEIS3Q99687 375 aa20.96■□□□□ 0.95
SHOX-201ENST00000334060 C1orf115Q9H7X2 142 aa20.96■□□□□ 0.95
SHOX-201ENST00000334060 NEURL1BA8MQ27 555 aa20.94■□□□□ 0.94
SHOX-201ENST00000334060 DDX58O95786 925 aaKnown RBP20.94■□□□□ 0.94
SHOX-201ENST00000334060 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
SHOX-201ENST00000334060 INTS3Q68E01 1043 aaKnown RBP20.94■□□□□ 0.94
SHOX-201ENST00000334060 AFDNP55196 1824 aaKnown RBP20.93■□□□□ 0.94
SHOX-201ENST00000334060 NBPF7P0C2Y1 421 aaPredicted RBP20.93■□□□□ 0.94
SHOX-201ENST00000334060 TCIRG1Q13488 830 aa20.93■□□□□ 0.94
SHOX-201ENST00000334060 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
SHOX-201ENST00000334060 ISCA1Q9BUE6 129 aa20.93■□□□□ 0.94
SHOX-201ENST00000334060 CHMP4AQ9BY43 222 aa20.93■□□□□ 0.94
SHOX-201ENST00000334060 ZPR1O75312 459 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
SHOX-201ENST00000334060 ERVV-1B6SEH8 477 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 SRCIN1Q9C0H9 1055 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 USP44Q9H0E7 712 aa20.92■□□□□ 0.94
SHOX-201ENST00000334060 ANKRD36CQ5JPF3 1778 aa20.91■□□□□ 0.94
SHOX-201ENST00000334060 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
SHOX-201ENST00000334060 NFIXQ14938 502 aa20.91■□□□□ 0.94
SHOX-201ENST00000334060 NIP7Q9Y221 180 aaKnown RBP eCLIP20.91■□□□□ 0.94
SHOX-201ENST00000334060 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
SHOX-201ENST00000334060 PXDNLA1KZ92 1463 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 DDR1Q08345 913 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 NLRP10Q86W26 655 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 NUTM1Q86Y26 1132 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 LINS1Q8NG48 757 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 A0A087WZG4 1122 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 ZBTB7BO15156 539 aaPredicted RBP20.9■□□□□ 0.94
SHOX-201ENST00000334060 ADRA2BP18089 450 aa20.9■□□□□ 0.94
SHOX-201ENST00000334060 GCKRQ14397 625 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms