RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
CDHR1-201ENST00000332904 HAP1P54257 671 aaPredicted RBP21.4■■□□□ 1.02
CDHR1-201ENST00000332904 KRT85P78386 507 aa21.4■■□□□ 1.02
CDHR1-201ENST00000332904 PTPN14Q15678 1187 aa21.4■■□□□ 1.02
CDHR1-201ENST00000332904 LARP1BQ659C4 914 aaKnown RBP21.4■■□□□ 1.02
CDHR1-201ENST00000332904 LRRC8AQ8IWT6 810 aa21.4■■□□□ 1.02
CDHR1-201ENST00000332904 FAM53CQ9NYF3 392 aa21.4■■□□□ 1.02
CDHR1-201ENST00000332904 UHRF1BP1LA0JNW5 1464 aa21.4■■□□□ 1.02
CDHR1-201ENST00000332904 A0A087WWV3 80 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 NR1I2O75469 434 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 ARAP3Q8WWN8 1544 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 PDRG1Q9NUG6 133 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 GOLGA6L4A6NEF3 574 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 TDRD7Q8NHU6 1098 aaKnown RBP21.39■■□□□ 1.01
CDHR1-201ENST00000332904 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.01
CDHR1-201ENST00000332904 PTH1RQ03431 593 aa21.38■■□□□ 1.01
CDHR1-201ENST00000332904 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
CDHR1-201ENST00000332904 FILIP1Q7Z7B0 1213 aa21.38■■□□□ 1.01
CDHR1-201ENST00000332904 LRRN4CLQ8ND94 238 aa21.38■■□□□ 1.01
CDHR1-201ENST00000332904 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
CDHR1-201ENST00000332904 FOXO3O43524 673 aa21.38■■□□□ 1.01
CDHR1-201ENST00000332904 SKILP12757 684 aa21.38■■□□□ 1.01
CDHR1-201ENST00000332904 SIGLEC1Q9BZZ2 1709 aa21.37■■□□□ 1.01
CDHR1-201ENST00000332904 PI4K2BQ8TCG2 481 aa21.37■■□□□ 1.01
CDHR1-201ENST00000332904 CDK12Q9NYV4 1490 aaPredicted RBP21.37■■□□□ 1.01
CDHR1-201ENST00000332904 ABCA9Q8IUA7 1624 aa21.37■■□□□ 1.01
CDHR1-201ENST00000332904 NYAP1Q6ZVC0 841 aa21.37■■□□□ 1.01
CDHR1-201ENST00000332904 TCEANC2Q96MN5 208 aa21.37■■□□□ 1.01
CDHR1-201ENST00000332904 HNRNPH2P55795 449 aaKnown RBP21.36■■□□□ 1.01
CDHR1-201ENST00000332904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.36■■□□□ 1.01
CDHR1-201ENST00000332904 CALCOCO1Q9P1Z2 691 aa21.36■■□□□ 1.01
CDHR1-201ENST00000332904 POGZQ7Z3K3 1410 aa21.36■■□□□ 1.01
CDHR1-201ENST00000332904 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
CDHR1-201ENST00000332904 TRIM34Q9BYJ4 488 aa21.36■■□□□ 1.01
CDHR1-201ENST00000332904 ERCC6LQ2NKX8 1250 aa21.35■■□□□ 1.01
CDHR1-201ENST00000332904 SPATA32Q96LK8 384 aa21.35■■□□□ 1.01
CDHR1-201ENST00000332904 TSPYL4Q9UJ04 414 aa21.35■■□□□ 1.01
CDHR1-201ENST00000332904 TPCN1Q9ULQ1 816 aa21.35■■□□□ 1.01
CDHR1-201ENST00000332904 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
CDHR1-201ENST00000332904 ERO1AQ96HE7 468 aa21.35■■□□□ 1.01
CDHR1-201ENST00000332904 TULP2O00295 520 aa21.34■■□□□ 1.01
CDHR1-201ENST00000332904 FRMPD1Q5SYB0 1578 aa21.34■■□□□ 1.01
CDHR1-201ENST00000332904 EIF4A2Q14240 407 aaKnown RBP21.34■■□□□ 1.01
CDHR1-201ENST00000332904 DNAJC2Q99543 621 aaKnown RBP21.34■■□□□ 1.01
CDHR1-201ENST00000332904 CLSTN2Q9H4D0 955 aa21.34■■□□□ 1.01
CDHR1-201ENST00000332904 GNAI3P08754 354 aa21.33■■□□□ 1.01
CDHR1-201ENST00000332904 C11orf57Q6ZUT1 292 aaPredicted RBP21.33■■□□□ 1.01
CDHR1-201ENST00000332904 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
CDHR1-201ENST00000332904 COG3Q96JB2 828 aa21.33■■□□□ 1.01
CDHR1-201ENST00000332904 CCDC171Q6TFL3 1326 aa21.33■■□□□ 1.01
CDHR1-201ENST00000332904 CLTCQ00610 1675 aaKnown RBP21.33■■□□□ 1.01
CDHR1-201ENST00000332904 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
CDHR1-201ENST00000332904 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
CDHR1-201ENST00000332904 SLU7O95391 586 aaKnown RBP21.32■■□□□ 1
CDHR1-201ENST00000332904 FLIIQ13045 1269 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 PGBD1Q96JS3 809 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 CYP46A1Q9Y6A2 500 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 VPS53Q5VIR6 699 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 LEO1Q8WVC0 666 aaPredicted RBP21.32■■□□□ 1
CDHR1-201ENST00000332904 PREX1Q8TCU6 1659 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 CYP2C19P33261 490 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 CERS3Q8IU89 383 aa21.32■■□□□ 1
CDHR1-201ENST00000332904 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
CDHR1-201ENST00000332904 CCZ1BP86790 482 aa21.31■■□□□ 1
CDHR1-201ENST00000332904 CCZ1P86791 482 aaPredicted RBP21.31■■□□□ 1
CDHR1-201ENST00000332904 FBXW7Q969H0 707 aa21.31■■□□□ 1
CDHR1-201ENST00000332904 EPB41L2O43491 1005 aaKnown RBP21.31■■□□□ 1
CDHR1-201ENST00000332904 LARP1Q6PKG0 1096 aaKnown RBP21.31■■□□□ 1
CDHR1-201ENST00000332904 CNTROBQ8N137 903 aa21.31■■□□□ 1
CDHR1-201ENST00000332904 CCAR2Q8N163 923 aaKnown RBP21.31■■□□□ 1
CDHR1-201ENST00000332904 KLHL34Q8N239 644 aa21.31■■□□□ 1
CDHR1-201ENST00000332904 DDX19AQ9NUU7 478 aaKnown RBP21.31■■□□□ 1
CDHR1-201ENST00000332904 FHOD1Q9Y613 1164 aa21.31■■□□□ 1
CDHR1-201ENST00000332904 ELP1O95163 1332 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 GOLGA6L19H0YKK7 550 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 SOX12O15370 315 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 RBM43Q6ZSC3 357 aaKnown RBP21.3■■□□□ 1
CDHR1-201ENST00000332904 STK31Q9BXU1 1019 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 USP44Q9H0E7 712 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 SH2B1Q9NRF2 756 aaPredicted RBP21.3■■□□□ 1
CDHR1-201ENST00000332904 ATP7BP35670 1465 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 PDIA4P13667 645 aaKnown RBP21.3■■□□□ 1
CDHR1-201ENST00000332904 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 NEK11Q8NG66 645 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 RHPN1Q8TCX5 695 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 ZSWIM6Q9HCJ5 1215 aa21.3■■□□□ 1
CDHR1-201ENST00000332904 POLR3GO15318 223 aaPredicted RBP21.29■■□□□ 1
CDHR1-201ENST00000332904 CLCN6P51797 869 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 STK3Q13188 491 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 IQCB1Q15051 598 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 AOX1Q06278 1338 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 NPHP3Q7Z494 1330 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 CRB1P82279 1406 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 PIK3C2BO00750 1634 aa21.29■■□□□ 1
CDHR1-201ENST00000332904 CEBPZQ03701 1054 aaKnown RBP21.29■■□□□ 1
CDHR1-201ENST00000332904 ZSCAN31Q96LW9 406 aaPredicted RBP21.29■■□□□ 1
CDHR1-201ENST00000332904 ERCC4Q92889 916 aaPredicted RBP21.28■■□□□ 1
CDHR1-201ENST00000332904 DDX11Q96FC9 970 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms