RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
VSTM4-202ENST00000332853 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
VSTM4-202ENST00000332853 GRM8O00222 908 aa15.29■□□□□ 0.04
VSTM4-202ENST00000332853 CCDC70Q6NSX1 233 aa15.29■□□□□ 0.04
VSTM4-202ENST00000332853 SLC4A8Q2Y0W8 1093 aa15.29■□□□□ 0.04
VSTM4-202ENST00000332853 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
VSTM4-202ENST00000332853 SH2B1Q9NRF2 756 aaPredicted RBP15.29■□□□□ 0.04
VSTM4-202ENST00000332853 RBM27Q9P2N5 1060 aaKnown RBP15.29■□□□□ 0.04
VSTM4-202ENST00000332853 NPHP3Q7Z494 1330 aa15.28■□□□□ 0.04
VSTM4-202ENST00000332853 KSR2Q6VAB6 950 aa15.28■□□□□ 0.04
VSTM4-202ENST00000332853 TRPM2O94759 1503 aa15.28■□□□□ 0.04
VSTM4-202ENST00000332853 CHD1O14646 1710 aa15.28■□□□□ 0.04
VSTM4-202ENST00000332853 MAP3K12Q12852 859 aa15.28■□□□□ 0.04
VSTM4-202ENST00000332853 USP5P45974 858 aa15.28■□□□□ 0.04
VSTM4-202ENST00000332853 TFIP11Q9UBB9 837 aaKnown RBP15.28■□□□□ 0.04
VSTM4-202ENST00000332853 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.04
VSTM4-202ENST00000332853 MAP3K11Q16584 847 aa15.27■□□□□ 0.04
VSTM4-202ENST00000332853 NECAB1Q8N987 351 aa15.27■□□□□ 0.04
VSTM4-202ENST00000332853 EDC4Q6P2E9 1401 aaKnown RBP15.27■□□□□ 0.04
VSTM4-202ENST00000332853 RBM10P98175 930 aaKnown RBP15.27■□□□□ 0.04
VSTM4-202ENST00000332853 ESYT1Q9BSJ8 1104 aa15.27■□□□□ 0.04
VSTM4-202ENST00000332853 LRRC2Q9BYS8 371 aa15.27■□□□□ 0.04
VSTM4-202ENST00000332853 KDM5CP41229 1560 aa15.27■□□□□ 0.03
VSTM4-202ENST00000332853 RANBP6O60518 1105 aaKnown RBP15.27■□□□□ 0.03
VSTM4-202ENST00000332853 KRT18P05783 430 aaKnown RBP15.27■□□□□ 0.03
VSTM4-202ENST00000332853 FILIP1LQ4L180 1135 aa15.27■□□□□ 0.03
VSTM4-202ENST00000332853 SOGA3Q5TF21 947 aa15.27■□□□□ 0.03
VSTM4-202ENST00000332853 TMX3Q96JJ7 454 aa15.27■□□□□ 0.03
VSTM4-202ENST00000332853 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
VSTM4-202ENST00000332853 LMBR1LQ6UX01 489 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 ORAI2Q96SN7 254 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 MAGEC2Q9UBF1 373 aaPredicted RBP15.26■□□□□ 0.03
VSTM4-202ENST00000332853 NOL7Q9UMY1 257 aaKnown RBP15.26■□□□□ 0.03
VSTM4-202ENST00000332853 ZHX3Q9H4I2 956 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 GOLGA8BA8MQT2 603 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
VSTM4-202ENST00000332853 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
VSTM4-202ENST00000332853 DCTPP1Q9H773 170 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 NPC1L1Q9UHC9 1359 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 IP6K1Q92551 441 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 C8orf76Q96K31 380 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 MAGI2Q86UL8 1455 aa15.26■□□□□ 0.03
VSTM4-202ENST00000332853 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
VSTM4-202ENST00000332853 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
VSTM4-202ENST00000332853 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
VSTM4-202ENST00000332853 DZIP1Q86YF9 867 aaKnown RBP15.25■□□□□ 0.03
VSTM4-202ENST00000332853 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
VSTM4-202ENST00000332853 CKAP2LQ8IYA6 745 aa15.25■□□□□ 0.03
VSTM4-202ENST00000332853 STX6O43752 255 aa15.25■□□□□ 0.03
VSTM4-202ENST00000332853 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
VSTM4-202ENST00000332853 FILIP1Q7Z7B0 1213 aa15.25■□□□□ 0.03
VSTM4-202ENST00000332853 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
VSTM4-202ENST00000332853 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 NEK1Q96PY6 1258 aa15.24■□□□□ 0.03
VSTM4-202ENST00000332853 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
VSTM4-202ENST00000332853 ZNF771Q7L3S4 317 aaPredicted RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 OTUD7AQ8TE49 926 aaPredicted RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
VSTM4-202ENST00000332853 CCDC183Q5T5S1 534 aa15.24■□□□□ 0.03
VSTM4-202ENST00000332853 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
VSTM4-202ENST00000332853 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
VSTM4-202ENST00000332853 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 IFIT3O14879 490 aaKnown RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
VSTM4-202ENST00000332853 OFD1O75665 1012 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 WASF1Q92558 559 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 MKNK2Q9HBH9 465 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 IQSEC3Q9UPP2 1182 aaPredicted RBP15.23■□□□□ 0.03
VSTM4-202ENST00000332853 GPS2Q13227 327 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
VSTM4-202ENST00000332853 CEP57L1Q8IYX8 460 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 PREX2Q70Z35 1606 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
VSTM4-202ENST00000332853 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
VSTM4-202ENST00000332853 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
VSTM4-202ENST00000332853 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
VSTM4-202ENST00000332853 ESPNB1AK53 854 aa15.22■□□□□ 0.03
VSTM4-202ENST00000332853 BICC1Q9H694 974 aaKnown RBP15.22■□□□□ 0.03
VSTM4-202ENST00000332853 GOLGA8AA7E2F4 631 aa15.22■□□□□ 0.03
VSTM4-202ENST00000332853 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
VSTM4-202ENST00000332853 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
VSTM4-202ENST00000332853 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
VSTM4-202ENST00000332853 CAGE1Q8TC20 777 aa15.22■□□□□ 0.03
VSTM4-202ENST00000332853 TSPOAP1O95153 1857 aa15.21■□□□□ 0.03
VSTM4-202ENST00000332853 LTKP29376 864 aa15.21■□□□□ 0.03
VSTM4-202ENST00000332853 SMARCE1Q969G3 411 aa15.21■□□□□ 0.03
VSTM4-202ENST00000332853 IL2RBP14784 551 aa15.21■□□□□ 0.03
VSTM4-202ENST00000332853 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
VSTM4-202ENST00000332853 SCAND2PQ9GZW5 306 aaPredicted RBP15.21■□□□□ 0.03
VSTM4-202ENST00000332853 SBNO1A3KN83 1393 aa15.21■□□□□ 0.02
VSTM4-202ENST00000332853 DACH1Q9UI36 760 aa15.21■□□□□ 0.02
VSTM4-202ENST00000332853 PLXNC1O60486 1568 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 KDM2BQ8NHM5 1336 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 479.2 ms