RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
TRIM49B-201ENST00000332682 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
TRIM49B-201ENST00000332682 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
TRIM49B-201ENST00000332682 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
TRIM49B-201ENST00000332682 CNTNAP4Q9C0A0 1308 aa15.25■□□□□ 0.03
TRIM49B-201ENST00000332682 ZNF330Q9Y3S2 320 aaPredicted RBP15.25■□□□□ 0.03
TRIM49B-201ENST00000332682 C4BP0C0L5 1744 aa15.25■□□□□ 0.03
TRIM49B-201ENST00000332682 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
TRIM49B-201ENST00000332682 MEIS3Q99687 375 aa15.24■□□□□ 0.03
TRIM49B-201ENST00000332682 METTL22Q9BUU2 404 aaPredicted RBP15.24■□□□□ 0.03
TRIM49B-201ENST00000332682 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
TRIM49B-201ENST00000332682 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
TRIM49B-201ENST00000332682 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
TRIM49B-201ENST00000332682 IBTKQ9P2D0 1353 aaPredicted RBP15.23■□□□□ 0.03
TRIM49B-201ENST00000332682 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
TRIM49B-201ENST00000332682 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
TRIM49B-201ENST00000332682 LINS1Q8NG48 757 aa15.23■□□□□ 0.03
TRIM49B-201ENST00000332682 IGKV5-2P06315 115 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 ZBTB3Q9H5J0 574 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 CWF19L2Q2TBE0 894 aaKnown RBP15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 KIF6Q6ZMV9 814 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 MYD88Q99836 296 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 C1orf115Q9H7X2 142 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 LRRC4BQ9NT99 713 aa15.22■□□□□ 0.03
TRIM49B-201ENST00000332682 MAP3K15Q6ZN16 1313 aa15.21■□□□□ 0.03
TRIM49B-201ENST00000332682 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.03
TRIM49B-201ENST00000332682 COL15A1P39059 1388 aa15.21■□□□□ 0.03
TRIM49B-201ENST00000332682 SLC27A3Q5K4L6 730 aa15.21■□□□□ 0.03
TRIM49B-201ENST00000332682 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
TRIM49B-201ENST00000332682 BCORQ6W2J9 1755 aa15.21■□□□□ 0.02
TRIM49B-201ENST00000332682 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.02
TRIM49B-201ENST00000332682 NUP98P52948 1817 aa15.2■□□□□ 0.02
TRIM49B-201ENST00000332682 NEURL1BA8MQ27 555 aa15.2■□□□□ 0.02
TRIM49B-201ENST00000332682 PLSCR1O15162 318 aa15.2■□□□□ 0.02
TRIM49B-201ENST00000332682 GNAI3P08754 354 aa15.2■□□□□ 0.02
TRIM49B-201ENST00000332682 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
TRIM49B-201ENST00000332682 APBA3O96018 575 aa15.19■□□□□ 0.02
TRIM49B-201ENST00000332682 NPM2Q86SE8 214 aaKnown RBP15.19■□□□□ 0.02
TRIM49B-201ENST00000332682 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
TRIM49B-201ENST00000332682 UBR3Q6ZT12 1888 aa15.19■□□□□ 0.02
TRIM49B-201ENST00000332682 ERVV-1B6SEH8 477 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 IGHDP01880 384 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 GCKRQ14397 625 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 GIGYF2Q6Y7W6 1299 aaKnown RBP15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 PROM2Q8N271 834 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 C4AP0C0L4 1744 aa15.18■□□□□ 0.02
TRIM49B-201ENST00000332682 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 GNPATO15228 680 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 UBTFL1P0CB47 393 aaPredicted RBP15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 TCIRG1Q13488 830 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 HLFQ16534 295 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 ARXQ96QS3 562 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 UTYO14607 1347 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 GRM8O00222 908 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 GNAI2P04899 355 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 SIRT2Q8IXJ6 389 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
TRIM49B-201ENST00000332682 A0A087WZG4 1122 aa15.16■□□□□ 0.02
TRIM49B-201ENST00000332682 CEP85Q6P2H3 762 aa15.16■□□□□ 0.02
TRIM49B-201ENST00000332682 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
TRIM49B-201ENST00000332682 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
TRIM49B-201ENST00000332682 LRRFIP2Q9Y608 721 aaKnown RBP15.16■□□□□ 0.02
TRIM49B-201ENST00000332682 TRIM28Q13263 835 aaKnown RBP15.15■□□□□ 0.02
TRIM49B-201ENST00000332682 HSP90AB3PQ58FF7 597 aa15.15■□□□□ 0.02
TRIM49B-201ENST00000332682 ANKRD44Q8N8A2 993 aa15.15■□□□□ 0.02
TRIM49B-201ENST00000332682 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
TRIM49B-201ENST00000332682 AK7Q96M32 723 aa15.15■□□□□ 0.02
TRIM49B-201ENST00000332682 RTCBQ9Y3I0 505 aaKnown RBP15.15■□□□□ 0.02
TRIM49B-201ENST00000332682 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
TRIM49B-201ENST00000332682 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
TRIM49B-201ENST00000332682 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
TRIM49B-201ENST00000332682 RGL2O15211 777 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 CASP7P55210 303 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 UBE3BQ7Z3V4 1068 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 TUBGCP6Q96RT7 1819 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 H7C1W4 665 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 ADRA2BP18089 450 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 GPTP24298 496 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 KAZALD1Q96I82 304 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 SUCLG2Q96I99 432 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 NARFQ9UHQ1 456 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 HDAC5Q9UQL6 1122 aa15.12■□□□□ 0.01
TRIM49B-201ENST00000332682 PHF14O94880 888 aa15.11■□□□□ 0.01
TRIM49B-201ENST00000332682 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
TRIM49B-201ENST00000332682 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
TRIM49B-201ENST00000332682 CAMKK2Q96RR4 588 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms