RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 PROSER3Q2NL68 480 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
DDR1-223ENST00000324771 PDCP20941 246 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 USP44Q9H0E7 712 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 TRPM1Q7Z4N2 1603 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 CLSTN1O94985 981 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 MBD3O95983 291 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 EIF4A1P60842 406 aaKnown RBP14.05□□□□□ -0.16
DDR1-223ENST00000324771 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
DDR1-223ENST00000324771 FAM89AQ96GI7 184 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 MINDY4BA8MYZ0 360 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 ME1P48163 572 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 CHST3Q7LGC8 479 aa14.05□□□□□ -0.16
DDR1-223ENST00000324771 TDO2P48775 406 aa14.04□□□□□ -0.16
DDR1-223ENST00000324771 KIF1BO60333 1816 aa14.04□□□□□ -0.16
DDR1-223ENST00000324771 ZNF594Q96JF6 807 aaPredicted RBP14.04□□□□□ -0.16
DDR1-223ENST00000324771 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
DDR1-223ENST00000324771 DDX21Q9NR30 783 aaKnown RBP eCLIP14.04□□□□□ -0.16
DDR1-223ENST00000324771 IL2RBP14784 551 aa14.04□□□□□ -0.16
DDR1-223ENST00000324771 CCDC144CPQ8IYA2 1237 aa14.04□□□□□ -0.16
DDR1-223ENST00000324771 EVI5LQ96CN4 794 aa14.04□□□□□ -0.16
DDR1-223ENST00000324771 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■■■■□ 25.7
DDR1-223ENST00000324771 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 LIMCH1Q9UPQ0 1083 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
DDR1-223ENST00000324771 CHMLP26374 656 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 SOS1Q07889 1333 aaPredicted RBP14.03□□□□□ -0.16
DDR1-223ENST00000324771 KRT85P78386 507 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 TFCP2Q12800 502 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 STK38Q15208 465 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 AIDAQ96BJ3 306 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 USP26Q9BXU7 913 aa14.03□□□□□ -0.16
DDR1-223ENST00000324771 SIRT2Q8IXJ6 389 aa14.02□□□□□ -0.16
DDR1-223ENST00000324771 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
DDR1-223ENST00000324771 CHAMP1Q96JM3 812 aa14.02□□□□□ -0.16
DDR1-223ENST00000324771 RBM8AQ9Y5S9 174 aaKnown RBP14.02□□□□□ -0.16
DDR1-223ENST00000324771 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.17
DDR1-223ENST00000324771 TPM4P67936 248 aa14.02□□□□□ -0.17
DDR1-223ENST00000324771 SAFBQ15424 915 aaKnown RBP eCLIP14.02□□□□□ -0.17
DDR1-223ENST00000324771 TSPY26PQ9H489 355 aa14.02□□□□□ -0.17
DDR1-223ENST00000324771 TET3O43151 1660 aa14.02□□□□□ -0.17
DDR1-223ENST00000324771 SUCLG2Q96I99 432 aa14.02□□□□□ -0.17
DDR1-223ENST00000324771 DCAF5Q96JK2 942 aa14.02□□□□□ -0.17
DDR1-223ENST00000324771 ALDH1L1O75891 902 aa14.01□□□□□ -0.17
DDR1-223ENST00000324771 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
DDR1-223ENST00000324771 TRIM5Q9C035 493 aa14.01□□□□□ -0.17
DDR1-223ENST00000324771 SPATA32Q96LK8 384 aa14.01□□□□□ -0.17
DDR1-223ENST00000324771 C8orf37Q96NL8 207 aa14.01□□□□□ -0.17
DDR1-223ENST00000324771 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
DDR1-223ENST00000324771 SYNMO15061 1565 aa14.01□□□□□ -0.17
DDR1-223ENST00000324771 E9PCH4 1651 aa14.01□□□□□ -0.17
DDR1-223ENST00000324771 GJB2P29033 226 aa14□□□□□ -0.17
DDR1-223ENST00000324771 ATP2B2Q01814 1243 aa14□□□□□ -0.17
DDR1-223ENST00000324771 TPD52L1Q16890 204 aaPredicted RBP14□□□□□ -0.17
DDR1-223ENST00000324771 CCDC24Q8N4L8 307 aa14□□□□□ -0.17
DDR1-223ENST00000324771 BRF1Q92994 677 aa14□□□□□ -0.17
DDR1-223ENST00000324771 CCDC129Q6ZRS4 1044 aa14□□□□□ -0.17
DDR1-223ENST00000324771 PPP1R1BQ9UD71 204 aaPredicted RBP14□□□□□ -0.17
DDR1-223ENST00000324771 ABCC4O15439 1325 aa14□□□□□ -0.17
DDR1-223ENST00000324771 ANKRD18BA2A2Z9 1011 aa14□□□□□ -0.17
DDR1-223ENST00000324771 KINO60870 393 aaKnown RBP14□□□□□ -0.17
DDR1-223ENST00000324771 ANKRD1Q15327 319 aa14□□□□□ -0.17
DDR1-223ENST00000324771 SIRT1Q96EB6 747 aa14□□□□□ -0.17
DDR1-223ENST00000324771 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
DDR1-223ENST00000324771 GIGYF1O75420 1035 aaPredicted RBP14□□□□□ -0.17
DDR1-223ENST00000324771 AMOTL1Q8IY63 956 aa14□□□□□ -0.17
DDR1-223ENST00000324771 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
DDR1-223ENST00000324771 SLAIN2Q9P270 581 aa14□□□□□ -0.17
DDR1-223ENST00000324771 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
DDR1-223ENST00000324771 DBNDD2Q9BQY9 259 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
DDR1-223ENST00000324771 A2ML1A8K2U0 1454 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 DNAJC10Q8IXB1 793 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 CCDC34Q96HJ3 373 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 UNC13BO14795 1591 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
DDR1-223ENST00000324771 IMMTQ16891 758 aaKnown RBP13.99□□□□□ -0.17
DDR1-223ENST00000324771 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
DDR1-223ENST00000324771 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
DDR1-223ENST00000324771 CROCC2H7BZ55 1655 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 RTL1A6NKG5 1358 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
DDR1-223ENST00000324771 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 SLC52A2Q9HAB3 445 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 AKAP2Q9Y2D5 859 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 USP6P35125 1406 aa13.98□□□□□ -0.17
DDR1-223ENST00000324771 DDB1Q16531 1140 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 GNL3LQ9NVN8 582 aaKnown RBP13.97□□□□□ -0.17
DDR1-223ENST00000324771 AXIN2Q9Y2T1 843 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 ZNF853P0CG23 659 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 KRT32Q14532 448 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 UNC5CLQ8IV45 518 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 TMEM94Q12767 1356 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 STX6O43752 255 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms