RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SCLT1Q96NL6 688 aa24.27■■□□□ 1.48
RNF40-201ENST00000324685 TRMT1Q9NXH9 659 aaKnown RBP24.27■■□□□ 1.48
RNF40-201ENST00000324685 BCCIPQ9P287 314 aaKnown RBP eCLIP24.27■■□□□ 1.48
RNF40-201ENST00000324685 PRKCSHP14314 528 aaPredicted RBP24.27■■□□□ 1.48
RNF40-201ENST00000324685 RNF187Q5TA31 235 aaPredicted RBP24.27■■□□□ 1.48
RNF40-201ENST00000324685 C16orf45Q96MC5 204 aaPredicted RBP24.27■■□□□ 1.48
RNF40-201ENST00000324685 ANKRD18BA2A2Z9 1011 aa24.26■■□□□ 1.47
RNF40-201ENST00000324685 TTF1Q15361 905 aaPredicted RBP24.26■■□□□ 1.47
RNF40-201ENST00000324685 GIGYF2Q6Y7W6 1299 aaKnown RBP24.26■■□□□ 1.47
RNF40-201ENST00000324685 CCDC97Q96F63 343 aaPredicted RBP24.26■■□□□ 1.47
RNF40-201ENST00000324685 ZPR1O75312 459 aa24.26■■□□□ 1.47
RNF40-201ENST00000324685 CCDC175P0C221 793 aa24.26■■□□□ 1.47
RNF40-201ENST00000324685 ZC3H6P61129 1189 aaKnown RBP24.26■■□□□ 1.47
RNF40-201ENST00000324685 SNW1Q13573 536 aaKnown RBP24.26■■□□□ 1.47
RNF40-201ENST00000324685 ADCY5O95622 1261 aa24.25■■□□□ 1.47
RNF40-201ENST00000324685 POLR3GO15318 223 aaPredicted RBP24.25■■□□□ 1.47
RNF40-201ENST00000324685 TCP11L1Q9NUJ3 509 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 CTR9Q6PD62 1173 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 HMG20BQ9P0W2 317 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 C20orf194Q5TEA3 1177 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 EHBP1Q8NDI1 1231 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 DBF4Q9UBU7 674 aaPredicted RBP24.24■■□□□ 1.47
RNF40-201ENST00000324685 SPECC1Q5M775 1068 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 LRRC27Q9C0I9 530 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 ECHDC1Q9NTX5 307 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 ANKIB1Q9P2G1 1089 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 CCDC40Q4G0X9 1142 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 BMP2KLQ5H9B9 411 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 STXBP4Q6ZWJ1 553 aa24.24■■□□□ 1.47
RNF40-201ENST00000324685 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
RNF40-201ENST00000324685 DNA2P51530 1060 aa24.23■■□□□ 1.47
RNF40-201ENST00000324685 KIF5BP33176 963 aa24.23■■□□□ 1.47
RNF40-201ENST00000324685 UBE2HP62256 183 aa24.23■■□□□ 1.47
RNF40-201ENST00000324685 CCT2P78371 535 aaKnown RBP24.23■■□□□ 1.47
RNF40-201ENST00000324685 HLTFQ14527 1009 aaKnown RBP eCLIP24.23■■□□□ 1.47
RNF40-201ENST00000324685 PAXBP1Q9Y5B6 917 aa24.23■■□□□ 1.47
RNF40-201ENST00000324685 IARSP41252 1262 aaKnown RBP24.23■■□□□ 1.47
RNF40-201ENST00000324685 CTNNA2P26232 953 aa24.22■■□□□ 1.47
RNF40-201ENST00000324685 PRDM10Q9NQV6 1147 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 TMCO5BA8MYB1 307 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 F6X3S4 739 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 PTCD1O75127 700 aaKnown RBP24.21■■□□□ 1.47
RNF40-201ENST00000324685 UBE4AQ14139 1066 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 CCDC82Q8N4S0 544 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 TRMT112Q9UI30 125 aaKnown RBP24.21■■□□□ 1.47
RNF40-201ENST00000324685 SPECC1LQ69YQ0 1117 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 TBC1D9Q6ZT07 1266 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 USP16Q9Y5T5 823 aa24.21■■□□□ 1.47
RNF40-201ENST00000324685 BMS1Q14692 1282 aaKnown RBP24.2■■□□□ 1.47
RNF40-201ENST00000324685 TMX1Q9H3N1 280 aa24.2■■□□□ 1.47
RNF40-201ENST00000324685 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
RNF40-201ENST00000324685 PRIMPOLQ96LW4 560 aa24.2■■□□□ 1.46
RNF40-201ENST00000324685 NSD2O96028 1365 aa24.2■■□□□ 1.46
RNF40-201ENST00000324685 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
RNF40-201ENST00000324685 IFI16Q16666 785 aaKnown RBP24.2■■□□□ 1.46
RNF40-201ENST00000324685 CEP135Q66GS9 1140 aa24.2■■□□□ 1.46
RNF40-201ENST00000324685 ZSCAN16Q9H4T2 348 aaPredicted RBP24.2■■□□□ 1.46
RNF40-201ENST00000324685 EPRSP07814 1512 aaKnown RBP24.2■■□□□ 1.46
RNF40-201ENST00000324685 MACROD2A1Z1Q3 448 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 FERMT2Q96AC1 680 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 CCDC171Q6TFL3 1326 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 TMEM67Q5HYA8 995 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 CCDC102BQ68D86 513 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 TRIM27P14373 513 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 ZNF165P49910 485 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 KLHL40Q2TBA0 621 aa24.19■■□□□ 1.46
RNF40-201ENST00000324685 BIN1O00499 593 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 FLIIQ13045 1269 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 PPM1EQ8WY54 764 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 CEP63Q96MT8 703 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 RMND1Q9NWS8 449 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 GOLIM4O00461 696 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 NEK1Q96PY6 1258 aa24.18■■□□□ 1.46
RNF40-201ENST00000324685 TTC22Q5TAA0 569 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 MAATS1Q7Z4T9 603 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 NCOA7Q8NI08 942 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 DYNC1I1O14576 645 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 METAP2P50579 478 aaKnown RBP eCLIP24.17■■□□□ 1.46
RNF40-201ENST00000324685 DDX12PQ92771 950 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 TFIP11Q9UBB9 837 aaKnown RBP24.17■■□□□ 1.46
RNF40-201ENST00000324685 PRXQ9BXM0 1461 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 PPP4R3BQ5MIZ7 849 aa24.17■■□□□ 1.46
RNF40-201ENST00000324685 FSD2A1L4K1 749 aa24.16■■□□□ 1.46
RNF40-201ENST00000324685 ORC3Q9UBD5 711 aaPredicted RBP24.16■■□□□ 1.46
RNF40-201ENST00000324685 NAIPQ13075 1403 aa24.16■■□□□ 1.46
RNF40-201ENST00000324685 GTF2F1P35269 517 aaKnown RBP eCLIP24.16■■□□□ 1.46
RNF40-201ENST00000324685 CKAP4Q07065 602 aaKnown RBP24.16■■□□□ 1.46
RNF40-201ENST00000324685 CEP112Q8N8E3 955 aa24.16■■□□□ 1.46
RNF40-201ENST00000324685 BBXQ8WY36 941 aaPredicted RBP24.16■■□□□ 1.46
RNF40-201ENST00000324685 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
RNF40-201ENST00000324685 PDE4BQ07343 736 aa24.16■■□□□ 1.46
RNF40-201ENST00000324685 TCERG1LQ5VWI1 586 aa24.16■■□□□ 1.46
RNF40-201ENST00000324685 KAT14Q9H8E8 782 aa24.15■■□□□ 1.46
RNF40-201ENST00000324685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.15■■□□□ 1.466e-7■■■■□ 20.7
RNF40-201ENST00000324685 NME9Q86XW9 330 aa24.15■■□□□ 1.46
RNF40-201ENST00000324685 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
RNF40-201ENST00000324685 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
RNF40-201ENST00000324685 GDPD2Q9HCC8 539 aa24.15■■□□□ 1.46
RNF40-201ENST00000324685 LDHCP07864 332 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms