RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 CCZ1BP86790 482 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 CCZ1P86791 482 aaPredicted RBP9.26□□□□□ -0.93
CD46-201ENST00000322875 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
CD46-201ENST00000322875 SMC3Q9UQE7 1217 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 CRB1P82279 1406 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■■□□ 16.1
CD46-201ENST00000322875 GJB2P29033 226 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 PLA2G4AP47712 749 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 RTF1Q92541 710 aaKnown RBP9.26□□□□□ -0.93
CD46-201ENST00000322875 MRFAP1L1Q96HT8 127 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 NOL10Q9BSC4 688 aaKnown RBP9.26□□□□□ -0.93
CD46-201ENST00000322875 CLSTN2Q9H4D0 955 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 EXOC6BQ9Y2D4 811 aa9.26□□□□□ -0.93
CD46-201ENST00000322875 FAM208AQ9UK61 1670 aaKnown RBP9.26□□□□□ -0.93
CD46-201ENST00000322875 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
CD46-201ENST00000322875 IQCB1Q15051 598 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 ERICH4A6NGS2 130 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 SLU7O95391 586 aaKnown RBP9.25□□□□□ -0.93
CD46-201ENST00000322875 CCT4P50991 539 aaKnown RBP9.25□□□□□ -0.93
CD46-201ENST00000322875 RAD51AP2Q09MP3 1159 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 HDGFL2Q7Z4V5 671 aaPredicted RBP9.25□□□□□ -0.93
CD46-201ENST00000322875 CAVIN2O95810 425 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 ATP8B2P98198 1209 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 CCAR2Q8N163 923 aaKnown RBP9.25□□□□□ -0.93
CD46-201ENST00000322875 PI4K2BQ8TCG2 481 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 TRIM5Q9C035 493 aa9.25□□□□□ -0.93
CD46-201ENST00000322875 MYO5BQ9ULV0 1848 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 DLC1Q96QB1 1528 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 MON2Q7Z3U7 1717 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 CHGAP10645 457 aaKnown RBP9.24□□□□□ -0.93
CD46-201ENST00000322875 PTPN14Q15678 1187 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 VPS53Q5VIR6 699 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 RILPL2Q969X0 211 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 DDX19AQ9NUU7 478 aaKnown RBP9.24□□□□□ -0.93
CD46-201ENST00000322875 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 PNMA6EA0A0J9YXQ4 647 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 GNAI2P04899 355 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 ARID5BQ14865 1188 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 TM6SF1Q9BZW5 370 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 ADCY9O60503 1353 aa9.24□□□□□ -0.93
CD46-201ENST00000322875 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 PNMA6AP0CW24 399 aaPredicted RBP9.23□□□□□ -0.93
CD46-201ENST00000322875 CAMK4Q16566 473 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 TRIM34Q9BYJ4 488 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 TNMDQ9H2S6 317 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 EFCC1Q9HA90 598 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
CD46-201ENST00000322875 DACT1Q9NYF0 836 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.23□□□□□ -0.93
CD46-201ENST00000322875 V9GYY5 206 aaPredicted RBP9.23□□□□□ -0.93
CD46-201ENST00000322875 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 C3P01024 1663 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 CLCN6P51797 869 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 ZSCAN31Q96LW9 406 aaPredicted RBP9.23□□□□□ -0.93
CD46-201ENST00000322875 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 NPHP3Q7Z494 1330 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 KIF2AO00139 706 aaPredicted RBP9.23□□□□□ -0.93
CD46-201ENST00000322875 ZNF165P49910 485 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 KRT85P78386 507 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 SAFB2Q14151 953 aaKnown RBP eCLIP9.23□□□□□ -0.931e-6■■□□□ 13.1
CD46-201ENST00000322875 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
CD46-201ENST00000322875 MLH3Q9UHC1 1453 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
CD46-201ENST00000322875 MYH15Q9Y2K3 1946 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 G2E3Q7L622 706 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 CCDC83Q8IWF9 413 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 DRC7Q8IY82 874 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 CKAP2LQ8IYA6 745 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
CD46-201ENST00000322875 YY1AP1Q9H869 796 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 PXDNLA1KZ92 1463 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 USP42Q9H9J4 1324 aaKnown RBP9.22□□□□□ -0.93
CD46-201ENST00000322875 GIGYF1O75420 1035 aaPredicted RBP9.22□□□□□ -0.93
CD46-201ENST00000322875 CHRM1P11229 460 aaPredicted RBP9.22□□□□□ -0.93
CD46-201ENST00000322875 SKILP12757 684 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 NOP2P46087 812 aaKnown RBP9.22□□□□□ -0.93
CD46-201ENST00000322875 KCNJ6P48051 423 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 LRRN4CLQ8ND94 238 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 CDK19Q9BWU1 502 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 LRRC37A3O60309 1634 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 ME3Q16798 604 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 PRAM1Q96QH2 718 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
CD46-201ENST00000322875 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.93
CD46-201ENST00000322875 PGBD1Q96JS3 809 aa9.21□□□□□ -0.93
CD46-201ENST00000322875 SCAND2PQ9GZW5 306 aaPredicted RBP9.21□□□□□ -0.93
CD46-201ENST00000322875 ALKQ9UM73 1620 aa9.21□□□□□ -0.94
CD46-201ENST00000322875 AKAP12Q02952 1782 aa9.21□□□□□ -0.94
CD46-201ENST00000322875 SOS1Q07889 1333 aaPredicted RBP9.21□□□□□ -0.94
CD46-201ENST00000322875 AGLP35573 1532 aa9.21□□□□□ -0.94
CD46-201ENST00000322875 ATP8B1O43520 1251 aa9.21□□□□□ -0.94
CD46-201ENST00000322875 NR1I2O75469 434 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms