RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PSMD7P51665 324 aa11.18□□□□□ -0.62
COL12A1-201ENST00000322507 EHBP1Q8NDI1 1231 aa11.18□□□□□ -0.62
COL12A1-201ENST00000322507 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 CCDC110Q8TBZ0 833 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 CCDC40Q4G0X9 1142 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 LACTBP83111 547 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-201ENST00000322507 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 CHD1LQ86WJ1 897 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 EBAG9O00559 213 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 ATP11AP98196 1134 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 TTC14Q96N46 770 aa11.17□□□□□ -0.62
COL12A1-201ENST00000322507 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-201ENST00000322507 GFAPP14136 432 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 IFT74Q96LB3 600 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 ALS2CR12Q96Q35 445 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
COL12A1-201ENST00000322507 ZNF652Q9Y2D9 606 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 PRR16Q569H4 304 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 HMOX1P09601 288 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 SLF2Q8IX21 1173 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
COL12A1-201ENST00000322507 IFFO1Q0D2I5 559 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 KCNH5Q8NCM2 988 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
COL12A1-201ENST00000322507 THEGQ9P2T0 379 aa11.16□□□□□ -0.62
COL12A1-201ENST00000322507 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
COL12A1-201ENST00000322507 LRRFIP2Q9Y608 721 aaKnown RBP11.16□□□□□ -0.62
COL12A1-201ENST00000322507 CETN1Q12798 172 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 KIF1CO43896 1103 aaKnown RBP11.15□□□□□ -0.62
COL12A1-201ENST00000322507 PRKAR2BP31323 418 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 CCDC150Q8NCX0 1101 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 RABEP2Q9H5N1 569 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 GIMAP4Q9NUV9 329 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 GLRX3O76003 335 aaKnown RBP11.15□□□□□ -0.62
COL12A1-201ENST00000322507 SPA17Q15506 151 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 TRIM4Q9C037 500 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 CCDC183Q5T5S1 534 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 FERP16591 822 aa11.15□□□□□ -0.62
COL12A1-201ENST00000322507 GCKP35557 465 aa11.15□□□□□ -0.63
COL12A1-201ENST00000322507 SCLT1Q96NL6 688 aa11.15□□□□□ -0.63
COL12A1-201ENST00000322507 KANK3Q6NY19 840 aa11.15□□□□□ -0.63
COL12A1-201ENST00000322507 CCDC144CPQ8IYA2 1237 aa11.15□□□□□ -0.63
COL12A1-201ENST00000322507 CAPZA3Q96KX2 299 aa11.15□□□□□ -0.63
COL12A1-201ENST00000322507 RAI14Q9P0K7 980 aa11.15□□□□□ -0.63
COL12A1-201ENST00000322507 ANO10Q9NW15 660 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 NOB1Q9ULX3 412 aaKnown RBP11.14□□□□□ -0.63
COL12A1-201ENST00000322507 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-201ENST00000322507 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-201ENST00000322507 PFDN1O60925 122 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 TSG101Q99816 390 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 CASQ1P31415 396 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 BTN2A1Q7KYR7 527 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 PHLDB2Q86SQ0 1253 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 MICALL1Q8N3F8 863 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 MGEA5O60502 916 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 FLIIQ13045 1269 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 PTPN14Q15678 1187 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 PPP4R3AQ6IN85 833 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 LRRC27Q9C0I9 530 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 RALGAPBQ86X10 1494 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 KIF1BPQ96EK5 621 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 SLC4A2P04920 1241 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 RLBP1P12271 317 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 OTUD6BQ8N6M0 293 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
COL12A1-201ENST00000322507 CFAP65Q6ZU64 1925 aaKnown RBP11.13□□□□□ -0.63
COL12A1-201ENST00000322507 RNF41Q9H4P4 317 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-201ENST00000322507 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
COL12A1-201ENST00000322507 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
COL12A1-201ENST00000322507 NECTIN2Q92692 538 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 FERMT1Q9BQL6 677 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 HYPKQ9NX55 129 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 CEP126Q9P2H0 1117 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 MAP3K9P80192 1104 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 ARMC9Q7Z3E5 817 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 TANGO6Q9C0B7 1094 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 PTPRCP08575 1304 aa11.13□□□□□ -0.63
COL12A1-201ENST00000322507 MAP4K4O95819 1239 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-201ENST00000322507 EIF5P55010 431 aaKnown RBP11.13□□□□□ -0.63
COL12A1-201ENST00000322507 USO1O60763 962 aaKnown RBP11.12□□□□□ -0.63
COL12A1-201ENST00000322507 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
COL12A1-201ENST00000322507 CCDC172P0C7W6 258 aa11.12□□□□□ -0.63
COL12A1-201ENST00000322507 TTC19Q6DKK2 380 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-201ENST00000322507 HOOK3Q86VS8 718 aa11.12□□□□□ -0.63
COL12A1-201ENST00000322507 PLVAPQ9BX97 442 aa11.12□□□□□ -0.63
COL12A1-201ENST00000322507 STXBP4Q6ZWJ1 553 aa11.12□□□□□ -0.63
COL12A1-201ENST00000322507 WDHD1O75717 1129 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-201ENST00000322507 TMEM266Q2M3C6 531 aa11.12□□□□□ -0.63
COL12A1-201ENST00000322507 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms