RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 SLC52A2Q9HAB3 445 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 TSHZ3Q63HK5 1081 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 TSPYL6Q8N831 410 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
NBPF3-201ENST00000318220 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 KRT18P05783 430 aaKnown RBP15.74■□□□□ 0.11
NBPF3-201ENST00000318220 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 CTNNA3Q9UI47 895 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
NBPF3-201ENST00000318220 ZNF804AQ7Z570 1209 aa15.74■□□□□ 0.11
NBPF3-201ENST00000318220 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
NBPF3-201ENST00000318220 WWC2Q6AWC2 1192 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 C2CD5Q86YS7 1000 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 PCMTD1Q96MG8 357 aaPredicted RBP15.73■□□□□ 0.11
NBPF3-201ENST00000318220 CARD10Q9BWT7 1032 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 ATP6V1DQ9Y5K8 247 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 USP16Q9Y5T5 823 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 HAND2P61296 217 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 GJD4Q96KN9 370 aaPredicted RBP15.73■□□□□ 0.11
NBPF3-201ENST00000318220 MEIS3Q99687 375 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 CYP7A1P22680 504 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
NBPF3-201ENST00000318220 ARHGEF25Q86VW2 580 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
NBPF3-201ENST00000318220 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 PLS1Q14651 629 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 CSPP1Q1MSJ5 1256 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
NBPF3-201ENST00000318220 MLH3Q9UHC1 1453 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 TRIM27P14373 513 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 IMMTQ16891 758 aaKnown RBP15.72■□□□□ 0.11
NBPF3-201ENST00000318220 TSPY2A6NKD2 308 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 SBNO1A3KN83 1393 aa15.72■□□□□ 0.11
NBPF3-201ENST00000318220 TPM4P67936 248 aa15.71■□□□□ 0.11
NBPF3-201ENST00000318220 IQCA1Q86XH1 822 aa15.71■□□□□ 0.1
NBPF3-201ENST00000318220 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
NBPF3-201ENST00000318220 NAA16Q6N069 864 aaPredicted RBP15.7■□□□□ 0.1
NBPF3-201ENST00000318220 BLOC1S2Q6QNY1 142 aa15.7■□□□□ 0.1
NBPF3-201ENST00000318220 PAF1Q8N7H5 531 aa15.7■□□□□ 0.1
NBPF3-201ENST00000318220 COL17A1Q9UMD9 1497 aaPredicted RBP15.7■□□□□ 0.1
NBPF3-201ENST00000318220 MX1P20591 662 aa15.7■□□□□ 0.1
NBPF3-201ENST00000318220 CHD1LQ86WJ1 897 aa15.7■□□□□ 0.1
NBPF3-201ENST00000318220 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
NBPF3-201ENST00000318220 KCNQ3O43525 872 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 DEKP35659 375 aaKnown RBP15.69■□□□□ 0.1
NBPF3-201ENST00000318220 DEFB132Q7Z7B7 95 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 C22orf23Q9BZE7 217 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 H7C1D1 291 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 PHKG2P15735 406 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 BECN2A8MW95 431 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 TAF5LO75529 589 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 ALDH1L2Q3SY69 923 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 SHANK2Q9UPX8 1470 aa15.69■□□□□ 0.1
NBPF3-201ENST00000318220 MBD5Q9P267 1494 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 PPFIA3O75145 1194 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 MPNDQ8N594 471 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 PUS7Q96PZ0 661 aaKnown RBP15.68■□□□□ 0.1
NBPF3-201ENST00000318220 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 WDR17Q8IZU2 1322 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 MMP10P09238 476 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 MIGA1Q8NAN2 632 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
NBPF3-201ENST00000318220 HOMER1Q86YM7 354 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
NBPF3-201ENST00000318220 ZBTB1Q9Y2K1 713 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 PRR36Q9H6K5 1346 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 JCADQ9P266 1359 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 ABCA8O94911 1581 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 NLRP1Q9C000 1473 aa15.67■□□□□ 0.1
NBPF3-201ENST00000318220 ZNF213O14771 459 aa15.66■□□□□ 0.1
NBPF3-201ENST00000318220 IL13P35225 146 aa15.66■□□□□ 0.1
NBPF3-201ENST00000318220 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
NBPF3-201ENST00000318220 CTCFLQ8NI51 663 aaPredicted RBP15.66■□□□□ 0.1
NBPF3-201ENST00000318220 SEC63Q9UGP8 760 aaKnown RBP15.66■□□□□ 0.1
NBPF3-201ENST00000318220 PDE6BP35913 854 aa15.66■□□□□ 0.1
NBPF3-201ENST00000318220 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
NBPF3-201ENST00000318220 PTPRCP08575 1304 aa15.66■□□□□ 0.1
NBPF3-201ENST00000318220 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
NBPF3-201ENST00000318220 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
NBPF3-201ENST00000318220 AAMPQ13685 434 aa15.66■□□□□ 0.1
NBPF3-201ENST00000318220 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
NBPF3-201ENST00000318220 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 ITGA6P23229 1130 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 ALDH1B1P30837 517 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 RAB11FIP4Q86YS3 637 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 KLHDC4Q8TBB5 520 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 CRNKL1Q9BZJ0 848 aaKnown RBP15.65■□□□□ 0.1
NBPF3-201ENST00000318220 ECHDC1Q9NTX5 307 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 SLC9C2Q5TAH2 1124 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
NBPF3-201ENST00000318220 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms