RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TMPOP42166 694 aaKnown RBP20.53■□□□□ 0.88
FOXR1-201ENST00000317011 HLFQ16534 295 aa20.53■□□□□ 0.88
FOXR1-201ENST00000317011 STYK1Q6J9G0 422 aa20.53■□□□□ 0.88
FOXR1-201ENST00000317011 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.88
FOXR1-201ENST00000317011 RASSF7Q02833 373 aa20.52■□□□□ 0.88
FOXR1-201ENST00000317011 TPTE2Q6XPS3 522 aa20.52■□□□□ 0.88
FOXR1-201ENST00000317011 ST5P78524 1137 aa20.51■□□□□ 0.87
FOXR1-201ENST00000317011 NBPF5PQ86XG9 351 aaPredicted RBP20.51■□□□□ 0.87
FOXR1-201ENST00000317011 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
FOXR1-201ENST00000317011 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
FOXR1-201ENST00000317011 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
FOXR1-201ENST00000317011 SBF1O95248 1867 aa20.5■□□□□ 0.87
FOXR1-201ENST00000317011 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
FOXR1-201ENST00000317011 DLEC1Q9Y238 1755 aa20.5■□□□□ 0.87
FOXR1-201ENST00000317011 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
FOXR1-201ENST00000317011 DLG5Q8TDM6 1919 aa20.5■□□□□ 0.87
FOXR1-201ENST00000317011 C21orf2O43822 256 aa20.49■□□□□ 0.87
FOXR1-201ENST00000317011 LRP10Q7Z4F1 713 aa20.49■□□□□ 0.87
FOXR1-201ENST00000317011 KDM2BQ8NHM5 1336 aa20.49■□□□□ 0.87
FOXR1-201ENST00000317011 PDIA6Q15084 440 aa20.48■□□□□ 0.87
FOXR1-201ENST00000317011 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
FOXR1-201ENST00000317011 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
FOXR1-201ENST00000317011 ERBB4Q15303 1308 aa20.48■□□□□ 0.87
FOXR1-201ENST00000317011 MAP3K15Q6ZN16 1313 aa20.48■□□□□ 0.87
FOXR1-201ENST00000317011 LTBP3Q9NS15 1303 aa20.48■□□□□ 0.87
FOXR1-201ENST00000317011 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
FOXR1-201ENST00000317011 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
FOXR1-201ENST00000317011 TTLL7Q6ZT98 887 aa20.47■□□□□ 0.87
FOXR1-201ENST00000317011 RRAGCQ9HB90 399 aa20.47■□□□□ 0.87
FOXR1-201ENST00000317011 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
FOXR1-201ENST00000317011 RRP7AQ9Y3A4 280 aaKnown RBP20.47■□□□□ 0.87
FOXR1-201ENST00000317011 CHL1O00533 1208 aa20.46■□□□□ 0.87
FOXR1-201ENST00000317011 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
FOXR1-201ENST00000317011 RUNDC1Q96C34 613 aa20.46■□□□□ 0.87
FOXR1-201ENST00000317011 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
FOXR1-201ENST00000317011 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
FOXR1-201ENST00000317011 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
FOXR1-201ENST00000317011 NPR1P16066 1061 aa20.45■□□□□ 0.86
FOXR1-201ENST00000317011 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
FOXR1-201ENST00000317011 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
FOXR1-201ENST00000317011 NPHP1O15259 732 aa20.44■□□□□ 0.86
FOXR1-201ENST00000317011 SOGA3Q5TF21 947 aa20.44■□□□□ 0.86
FOXR1-201ENST00000317011 ZNF34Q8IZ26 560 aa20.44■□□□□ 0.86
FOXR1-201ENST00000317011 MYL6BP14649 208 aa20.43■□□□□ 0.86
FOXR1-201ENST00000317011 FSTL1Q12841 308 aa20.43■□□□□ 0.86
FOXR1-201ENST00000317011 CRY2Q49AN0 593 aa20.43■□□□□ 0.86
FOXR1-201ENST00000317011 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
FOXR1-201ENST00000317011 POTECB2RU33 542 aa20.42■□□□□ 0.86
FOXR1-201ENST00000317011 CCDC146Q8IYE0 955 aa20.42■□□□□ 0.86
FOXR1-201ENST00000317011 DNAJC5GQ8N7S2 189 aa20.42■□□□□ 0.86
FOXR1-201ENST00000317011 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
FOXR1-201ENST00000317011 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
FOXR1-201ENST00000317011 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
FOXR1-201ENST00000317011 APLP1P51693 650 aa20.41■□□□□ 0.86
FOXR1-201ENST00000317011 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
FOXR1-201ENST00000317011 TAOK3Q9H2K8 898 aa20.41■□□□□ 0.86
FOXR1-201ENST00000317011 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
FOXR1-201ENST00000317011 SLX4Q8IY92 1834 aa20.41■□□□□ 0.86
FOXR1-201ENST00000317011 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
FOXR1-201ENST00000317011 SUSD4Q5VX71 490 aa20.4■□□□□ 0.86
FOXR1-201ENST00000317011 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
FOXR1-201ENST00000317011 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
FOXR1-201ENST00000317011 IBTKQ9P2D0 1353 aaPredicted RBP20.39■□□□□ 0.85
FOXR1-201ENST00000317011 FAM177BA6PVY3 158 aa20.39■□□□□ 0.85
FOXR1-201ENST00000317011 EIF2S2P20042 333 aaKnown RBP20.39■□□□□ 0.85
FOXR1-201ENST00000317011 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
FOXR1-201ENST00000317011 WDR43Q15061 677 aaKnown RBP eCLIP20.39■□□□□ 0.85
FOXR1-201ENST00000317011 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
FOXR1-201ENST00000317011 PROSER3Q2NL68 480 aa20.39■□□□□ 0.85
FOXR1-201ENST00000317011 ERFEQ4G0M1 354 aa20.39■□□□□ 0.85
FOXR1-201ENST00000317011 ZBTB3Q9H5J0 574 aa20.39■□□□□ 0.85
FOXR1-201ENST00000317011 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
FOXR1-201ENST00000317011 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
FOXR1-201ENST00000317011 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
FOXR1-201ENST00000317011 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
FOXR1-201ENST00000317011 GTF2E1P29083 439 aaPredicted RBP20.37■□□□□ 0.85
FOXR1-201ENST00000317011 CCDC93Q567U6 631 aa20.37■□□□□ 0.85
FOXR1-201ENST00000317011 SLC10A5Q5PT55 438 aa20.37■□□□□ 0.85
FOXR1-201ENST00000317011 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
FOXR1-201ENST00000317011 NTSR2O95665 410 aa20.36■□□□□ 0.85
FOXR1-201ENST00000317011 PARP10Q53GL7 1025 aa20.36■□□□□ 0.85
FOXR1-201ENST00000317011 RTKN2Q8IZC4 609 aa20.36■□□□□ 0.85
FOXR1-201ENST00000317011 ABCC12Q96J65 1359 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 ANXA1P04083 346 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 ZNF853P0CG23 659 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 GPTP24298 496 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
FOXR1-201ENST00000317011 KRT24Q2M2I5 525 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 CFAP44Q96MT7 982 aa20.35■□□□□ 0.85
FOXR1-201ENST00000317011 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
FOXR1-201ENST00000317011 HOXB7P09629 217 aa20.34■□□□□ 0.85
FOXR1-201ENST00000317011 OLFM4Q6UX06 510 aa20.34■□□□□ 0.85
FOXR1-201ENST00000317011 PPP1R42Q7Z4L9 355 aa20.34■□□□□ 0.85
FOXR1-201ENST00000317011 SMC1BQ8NDV3 1235 aa20.34■□□□□ 0.85
FOXR1-201ENST00000317011 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
FOXR1-201ENST00000317011 NUP98P52948 1817 aa20.34■□□□□ 0.85
FOXR1-201ENST00000317011 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.85
FOXR1-201ENST00000317011 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
FOXR1-201ENST00000317011 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms