RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 SIRT2Q8IXJ6 389 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 CCDC39Q9UFE4 941 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 MED14O60244 1454 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
PCDHB9-201ENST00000316105 MPNDQ8N594 471 aa15.94■□□□□ 0.14
PCDHB9-201ENST00000316105 KDM4AO75164 1064 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 STARD3NLO95772 234 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 XRCC6P12956 609 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 CCDC34Q96HJ3 373 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 SH2B1Q9NRF2 756 aaPredicted RBP15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 DDX11Q96FC9 970 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 HOXB7P09629 217 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 PANK2Q9BZ23 570 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 KCNQ3O43525 872 aa15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.93■□□□□ 0.14
PCDHB9-201ENST00000316105 IFIT1P09914 478 aaKnown RBP15.92■□□□□ 0.14
PCDHB9-201ENST00000316105 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHB9-201ENST00000316105 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
PCDHB9-201ENST00000316105 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHB9-201ENST00000316105 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
PCDHB9-201ENST00000316105 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
PCDHB9-201ENST00000316105 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 MROH1Q8NDA8 1641 aa15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 ERICH2A1L162 156 aa15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 SDF4Q9BRK5 362 aa15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 CWC25Q9NXE8 425 aaPredicted RBP15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
PCDHB9-201ENST00000316105 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 METTL24Q5JXM2 366 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 ZCRB1Q8TBF4 217 aaKnown RBP15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 CLTCQ00610 1675 aaKnown RBP15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 NEURL4Q96JN8 1562 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 STX6O43752 255 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 TCEANC2Q96MN5 208 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 GOLIM4O00461 696 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 ZNF790Q6PG37 636 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 BICC1Q9H694 974 aaKnown RBP15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
PCDHB9-201ENST00000316105 HSPA2P54652 639 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 MPHOSPH8Q99549 860 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 PPLO60437 1756 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 GJB2P29033 226 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 RASSF8Q8NHQ8 419 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 RBM8AQ9Y5S9 174 aaKnown RBP15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 CCDC192P0DO97 292 aa15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 DDX17Q92841 729 aaKnown RBP15.89■□□□□ 0.13
PCDHB9-201ENST00000316105 NUTM2BA6NNL0 878 aaPredicted RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 NUTM2EB1AL46 878 aaPredicted RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 KINO60870 393 aaKnown RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 GPTP24298 496 aa15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 RRP12Q5JTH9 1297 aaKnown RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 TNMDQ9H2S6 317 aa15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 DCAF5Q96JK2 942 aa15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 IFIT5Q13325 482 aaKnown RBP15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 AKAP2Q9Y2D5 859 aa15.88■□□□□ 0.13
PCDHB9-201ENST00000316105 ZSCAN23Q3MJ62 389 aa15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 SNRKQ9NRH2 765 aa15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 SAFBQ15424 915 aaKnown RBP eCLIP15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 ZNF396Q96N95 335 aaPredicted RBP15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 TRIM5Q9C035 493 aa15.87■□□□□ 0.13
PCDHB9-201ENST00000316105 NMIQ13287 307 aaPredicted RBP15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 STK38Q15208 465 aa15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 ME1P48163 572 aa15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 KLHDC4Q8TBB5 520 aa15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 NUP62CLQ9H1M0 184 aa15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 CREBRFQ8IUR6 639 aa15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 STK11IPQ8N1F8 1099 aa15.86■□□□□ 0.13
PCDHB9-201ENST00000316105 PDIA4P13667 645 aaKnown RBP15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 AK2P54819 239 aa15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 ZSCAN25Q6NSZ9 544 aa15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 SPC24Q8NBT2 197 aa15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 PREX1Q8TCU6 1659 aa15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
PCDHB9-201ENST00000316105 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 CPA1P15085 419 aa15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 SART3Q15020 963 aaKnown RBP15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 ZSCAN30Q86W11 494 aa15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 MYO3AQ8NEV4 1616 aa15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 CFAP45Q9UL16 551 aa15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 CAMK4Q16566 473 aa15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 SUCLG2Q96I99 432 aa15.84■□□□□ 0.13
PCDHB9-201ENST00000316105 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms