RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 TMX3Q96JJ7 454 aa7.5□□□□□ -1.21
SPATA9-202ENST00000316087 PCMTD1Q96MG8 357 aaPredicted RBP7.5□□□□□ -1.21
SPATA9-202ENST00000316087 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
SPATA9-202ENST00000316087 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 FMN2Q9NZ56 1722 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 GOLGA6L6A8MZA4 724 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 ELL2O00472 640 aaPredicted RBP7.49□□□□□ -1.21
SPATA9-202ENST00000316087 PTMAP06454 111 aaKnown RBP7.49□□□□□ -1.21
SPATA9-202ENST00000316087 PYGBP11216 843 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 PLCG2P16885 1265 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 NME9Q86XW9 330 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 IFNL1Q8IU54 200 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 RUFY2Q8WXA3 655 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 TMEM106CQ9BVX2 250 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 MFRPQ9BY79 579 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 TUBGCP6Q96RT7 1819 aa7.49□□□□□ -1.21
SPATA9-202ENST00000316087 FLT4P35916 1363 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 KDRP35968 1356 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 LRRC37A3O60309 1634 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 CRB1P82279 1406 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 RIMS1Q86UR5 1692 aaKnown RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 PRIM1P49642 420 aaKnown RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 CCDC183Q5T5S1 534 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 SULT6B1Q6IMI4 303 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 PARP9Q8IXQ6 854 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 ZSCAN31Q96LW9 406 aaPredicted RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 THUMPD2Q9BTF0 503 aaKnown RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 ARIH1Q9Y4X5 557 aaPredicted RBP7.48□□□□□ -1.21
SPATA9-202ENST00000316087 SBNO1A3KN83 1393 aa7.48□□□□□ -1.21
SPATA9-202ENST00000316087 PTPRUQ92729 1446 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 PATL2C9JE40 543 aaKnown RBP7.47□□□□□ -1.21
SPATA9-202ENST00000316087 HOXB7P09629 217 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
SPATA9-202ENST00000316087 ATP8B2P98198 1209 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 EIF4A2Q14240 407 aaKnown RBP7.47□□□□□ -1.21
SPATA9-202ENST00000316087 GPT2Q8TD30 523 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 TSPYL4Q9UJ04 414 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 SALL3Q9BXA9 1300 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 FAM208AQ9UK61 1670 aaKnown RBP7.47□□□□□ -1.21
SPATA9-202ENST00000316087 USP6P35125 1406 aa7.47□□□□□ -1.21
SPATA9-202ENST00000316087 SYCE3A1L190 88 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 HIP1O00291 1037 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 CAVIN2O95810 425 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 CHMLP26374 656 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 UBE2HP62256 183 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 WAPLQ7Z5K2 1190 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 CNTROBQ8N137 903 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 GPATCH3Q96I76 525 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 MEIS3Q99687 375 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 SH2B1Q9NRF2 756 aaPredicted RBP7.46□□□□□ -1.21
SPATA9-202ENST00000316087 USP25Q9UHP3 1055 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 TTC41PQ6P2S7 1318 aa7.46□□□□□ -1.21
SPATA9-202ENST00000316087 USP54Q70EL1 1684 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 TRIM6-TRIM34B2RNG4 842 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 PDCP20941 246 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 HSPA4P34932 840 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 PKNOX2Q96KN3 472 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 LARP6Q9BRS8 491 aaKnown RBP7.46□□□□□ -1.22
SPATA9-202ENST00000316087 DIAPH3Q9NSV4 1193 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 TMEM63CQ9P1W3 806 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 ZDHHC9Q9Y397 364 aa7.46□□□□□ -1.22
SPATA9-202ENST00000316087 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
SPATA9-202ENST00000316087 XRN1Q8IZH2 1706 aaKnown RBP7.46□□□□□ -1.22
SPATA9-202ENST00000316087 DIP2AQ14689 1571 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 UQCRHLA0A096LP55 91 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 FAM83GA6ND36 823 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 UQCRHP07919 91 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 UBTFL1P0CB47 393 aaPredicted RBP7.45□□□□□ -1.22
SPATA9-202ENST00000316087 GTF2F1P35269 517 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPATA9-202ENST00000316087 PDE4CQ08493 712 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 KCNA1Q09470 495 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 ERC1Q8IUD2 1116 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 C16orf71Q8IYS4 520 aaPredicted RBP7.45□□□□□ -1.22
SPATA9-202ENST00000316087 ZGPATQ8N5A5 531 aaKnown RBP7.45□□□□□ -1.22
SPATA9-202ENST00000316087 PIBF1Q8WXW3 757 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 CHMP4CQ96CF2 233 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 KIF1BPQ96EK5 621 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 TM6SF1Q9BZW5 370 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 LIMCH1Q9UPQ0 1083 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 CCDC171Q6TFL3 1326 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 NCKAP5LQ9HCH0 1330 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 MAP3K5Q99683 1374 aa7.45□□□□□ -1.22
SPATA9-202ENST00000316087 AK9Q5TCS8 1911 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 UNCXA6NJT0 531 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 ZSCAN22P10073 491 aaPredicted RBP7.44□□□□□ -1.22
SPATA9-202ENST00000316087 FKBP5Q13451 457 aaPredicted RBP7.44□□□□□ -1.22
SPATA9-202ENST00000316087 RRS1Q15050 365 aaKnown RBP7.44□□□□□ -1.22
SPATA9-202ENST00000316087 ANKRD1Q15327 319 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 DNTTIP2Q5QJE6 756 aaKnown RBP7.44□□□□□ -1.22
SPATA9-202ENST00000316087 FBXO31Q5XUX0 539 aaPredicted RBP7.44□□□□□ -1.22
SPATA9-202ENST00000316087 SLC4A10Q6U841 1118 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 SMAP1Q8IYB5 467 aaPredicted RBP7.44□□□□□ -1.22
SPATA9-202ENST00000316087 MYRIPQ8NFW9 859 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 SSH3Q8TE77 659 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 CCDC102AQ96A19 550 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms