RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CFAP44Q96MT7 982 aa19.13■□□□□ 0.65
PPP1CA-201ENST00000312989 SETDB2Q96T68 719 aa19.13■□□□□ 0.65
PPP1CA-201ENST00000312989 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
PPP1CA-201ENST00000312989 ARFGEF1Q9Y6D6 1849 aa19.12■□□□□ 0.65
PPP1CA-201ENST00000312989 ERVV-1B6SEH8 477 aa19.12■□□□□ 0.65
PPP1CA-201ENST00000312989 MYL6BP14649 208 aa19.12■□□□□ 0.65
PPP1CA-201ENST00000312989 DALRD3Q5D0E6 543 aaKnown RBP19.12■□□□□ 0.65
PPP1CA-201ENST00000312989 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
PPP1CA-201ENST00000312989 UBN2Q6ZU65 1347 aa19.11■□□□□ 0.65
PPP1CA-201ENST00000312989 ANXA1P04083 346 aa19.11■□□□□ 0.65
PPP1CA-201ENST00000312989 C2CD5Q86YS7 1000 aa19.11■□□□□ 0.65
PPP1CA-201ENST00000312989 CNBD1Q8NA66 436 aa19.11■□□□□ 0.65
PPP1CA-201ENST00000312989 KLRG2A4D1S0 409 aaPredicted RBP19.1■□□□□ 0.65
PPP1CA-201ENST00000312989 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
PPP1CA-201ENST00000312989 NGEFQ8N5V2 710 aa19.1■□□□□ 0.65
PPP1CA-201ENST00000312989 NIP7Q9Y221 180 aaKnown RBP eCLIP19.1■□□□□ 0.65
PPP1CA-201ENST00000312989 ZNF652Q9Y2D9 606 aa19.1■□□□□ 0.65
PPP1CA-201ENST00000312989 ANP32CO43423 234 aa19.09■□□□□ 0.65
PPP1CA-201ENST00000312989 EIF2S2P20042 333 aaKnown RBP19.09■□□□□ 0.65
PPP1CA-201ENST00000312989 PRELPP51888 382 aa19.09■□□□□ 0.65
PPP1CA-201ENST00000312989 ABCC12Q96J65 1359 aa19.09■□□□□ 0.65
PPP1CA-201ENST00000312989 ZBTB3Q9H5J0 574 aa19.08■□□□□ 0.65
PPP1CA-201ENST00000312989 MRS2Q9HD23 443 aa19.08■□□□□ 0.65
PPP1CA-201ENST00000312989 IFT57Q9NWB7 429 aa19.08■□□□□ 0.65
PPP1CA-201ENST00000312989 HOXB7P09629 217 aa19.07■□□□□ 0.64
PPP1CA-201ENST00000312989 SRGNP10124 158 aa19.07■□□□□ 0.64
PPP1CA-201ENST00000312989 ARHGAP27Q6ZUM4 889 aa19.07■□□□□ 0.64
PPP1CA-201ENST00000312989 ZNF34Q8IZ26 560 aa19.07■□□□□ 0.64
PPP1CA-201ENST00000312989 LAS1LQ9Y4W2 734 aaKnown RBP19.07■□□□□ 0.64
PPP1CA-201ENST00000312989 TNRC6CQ9HCJ0 1690 aaKnown RBP19.07■□□□□ 0.64
PPP1CA-201ENST00000312989 H0YIN7 160 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 PDE6BP35913 854 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 CCDC27Q2M243 656 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 GIGYF2Q6Y7W6 1299 aaKnown RBP19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 NBPF5PQ86XG9 351 aaPredicted RBP19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 IBTKQ9P2D0 1353 aaPredicted RBP19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 TTLL6Q8N841 843 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 DDX21Q9NR30 783 aaKnown RBP eCLIP19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
PPP1CA-201ENST00000312989 RIC1Q4ADV7 1423 aa19.05■□□□□ 0.64
PPP1CA-201ENST00000312989 NFKBIEO00221 500 aa19.05■□□□□ 0.64
PPP1CA-201ENST00000312989 ST5P78524 1137 aa19.05■□□□□ 0.64
PPP1CA-201ENST00000312989 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
PPP1CA-201ENST00000312989 KIF6Q6ZMV9 814 aa19.05■□□□□ 0.64
PPP1CA-201ENST00000312989 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
PPP1CA-201ENST00000312989 NTSR2O95665 410 aa19.04■□□□□ 0.64
PPP1CA-201ENST00000312989 RASSF7Q02833 373 aa19.04■□□□□ 0.64
PPP1CA-201ENST00000312989 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
PPP1CA-201ENST00000312989 SUSD4Q5VX71 490 aa19.04■□□□□ 0.64
PPP1CA-201ENST00000312989 COPS6Q7L5N1 327 aa19.04■□□□□ 0.64
PPP1CA-201ENST00000312989 XAGE3Q8WTP9 111 aa19.04■□□□□ 0.64
PPP1CA-201ENST00000312989 GPTP24298 496 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 GNAI1P63096 354 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 HDGFL1Q5TGJ6 251 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 STYK1Q6J9G0 422 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 TPTE2Q6XPS3 522 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 WWC1Q8IX03 1113 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 NUP98P52948 1817 aa19.03■□□□□ 0.64
PPP1CA-201ENST00000312989 FAM177BA6PVY3 158 aa19.02■□□□□ 0.64
PPP1CA-201ENST00000312989 CRY2Q49AN0 593 aa19.02■□□□□ 0.64
PPP1CA-201ENST00000312989 C9orf131Q5VYM1 1079 aa19.02■□□□□ 0.64
PPP1CA-201ENST00000312989 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.64
PPP1CA-201ENST00000312989 C8orf58Q8NAV2 365 aa19.02■□□□□ 0.64
PPP1CA-201ENST00000312989 SNED1Q8TER0 1413 aa19.02■□□□□ 0.63
PPP1CA-201ENST00000312989 ERFEQ4G0M1 354 aa19.01■□□□□ 0.63
PPP1CA-201ENST00000312989 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
PPP1CA-201ENST00000312989 MASTLQ96GX5 879 aa19.01■□□□□ 0.63
PPP1CA-201ENST00000312989 CALD1Q05682 793 aaKnown RBP19■□□□□ 0.63
PPP1CA-201ENST00000312989 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
PPP1CA-201ENST00000312989 C3orf67Q6ZVT6 689 aa19■□□□□ 0.63
PPP1CA-201ENST00000312989 TSPYL6Q8N831 410 aa18.99■□□□□ 0.63
PPP1CA-201ENST00000312989 TSR2Q969E8 191 aaKnown RBP18.99■□□□□ 0.63
PPP1CA-201ENST00000312989 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
PPP1CA-201ENST00000312989 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
PPP1CA-201ENST00000312989 SLX4Q8IY92 1834 aa18.99■□□□□ 0.63
PPP1CA-201ENST00000312989 C21orf2O43822 256 aa18.98■□□□□ 0.63
PPP1CA-201ENST00000312989 NPR1P16066 1061 aa18.98■□□□□ 0.63
PPP1CA-201ENST00000312989 KIF3CO14782 793 aa18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 AIMP1Q12904 312 aaKnown RBP18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 SLC51AQ86UW1 340 aa18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 NLRP10Q86W26 655 aa18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 ZNF526Q8TF50 670 aaPredicted RBP18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 CNKSR1Q969H4 720 aa18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 NYXQ9GZU5 481 aa18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 IL16Q14005 1332 aa18.97■□□□□ 0.63
PPP1CA-201ENST00000312989 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 NPHP1O15259 732 aa18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 C1QTNF8P60827 252 aa18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 TCIRG1Q13488 830 aa18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 PARP10Q53GL7 1025 aa18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 GPBP1L1Q9HC44 474 aaPredicted RBP18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 RNF181Q9P0P0 153 aa18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
PPP1CA-201ENST00000312989 SBF1O95248 1867 aa18.95■□□□□ 0.62
PPP1CA-201ENST00000312989 HOXA10P31260 410 aaPredicted RBP18.95■□□□□ 0.62
PPP1CA-201ENST00000312989 SLC10A5Q5PT55 438 aa18.95■□□□□ 0.62
PPP1CA-201ENST00000312989 OLFM4Q6UX06 510 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms