RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 KCNB2Q92953 911 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 ATP6V1DQ9Y5K8 247 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 UTYO14607 1347 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 GCP02774 474 aa11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 EVI5LQ96CN4 794 aa11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 TSPY26PQ9H489 355 aa11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
LSMEM1-201ENST00000312849 MST1RQ04912 1400 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 CSPP1Q1MSJ5 1256 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 ANKRD24Q8TF21 1146 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 SH2B1Q9NRF2 756 aaPredicted RBP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 SYCE3A1L190 88 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 MAP4K4O95819 1239 aaPredicted RBP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 TPM2P07951 284 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 IL25Q9H293 177 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 CCDC39Q9UFE4 941 aa11.61□□□□□ -0.55
LSMEM1-201ENST00000312849 ABCC6O95255 1503 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 PXDNQ92626 1479 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 ZSCAN22P10073 491 aaPredicted RBP11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 TERF1P54274 439 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 AK2P54819 239 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 UVSSAQ2YD98 709 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 FAM184AQ8NB25 1140 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 NOL7Q9UMY1 257 aaKnown RBP11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 RPAP1Q9BWH6 1393 aaPredicted RBP11.6□□□□□ -0.55
LSMEM1-201ENST00000312849 GRM8O00222 908 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 OFD1O75665 1012 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 RGPD5Q99666 1765 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 NPHP4O75161 1426 aaPredicted RBP11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 STX6O43752 255 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 ZKSCAN1P17029 563 aaPredicted RBP11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 USP48Q86UV5 1035 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 SNRKQ9NRH2 765 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 CYP46A1Q9Y6A2 500 aa11.59□□□□□ -0.55
LSMEM1-201ENST00000312849 ANXA1P04083 346 aa11.58□□□□□ -0.56
LSMEM1-201ENST00000312849 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
LSMEM1-201ENST00000312849 PSMA5P28066 241 aa11.58□□□□□ -0.56
LSMEM1-201ENST00000312849 CCDC183Q5T5S1 534 aa11.58□□□□□ -0.56
LSMEM1-201ENST00000312849 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
LSMEM1-201ENST00000312849 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
LSMEM1-201ENST00000312849 MRC1P22897 1456 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 UBE2HP62256 183 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 AACSQ86V21 672 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 ALS2Q96Q42 1657 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 F13A1P00488 732 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 SYT1P21579 422 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 PROSER3Q2NL68 480 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 CHAMP1Q96JM3 812 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 ZKSCAN5Q9Y2L8 839 aa11.57□□□□□ -0.56
LSMEM1-201ENST00000312849 ADAMTSL3P82987 1691 aa11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 C5P01031 1676 aa11.56□□□□□ -0.56
LSMEM1-201ENST00000312849 PTH1RQ03431 593 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 RIC3Q7Z5B4 369 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 BICC1Q9H694 974 aaKnown RBP11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 COL15A1P39059 1388 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 GADD45BO75293 160 aaPredicted RBP11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 SASH1O94885 1247 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 PDCP20941 246 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 PDIA6Q15084 440 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 RAPGEF4Q8WZA2 1011 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 ORAI2Q96SN7 254 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 HMG20BQ9P0W2 317 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms