RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 HMGB2P26583 209 aaKnown RBP28.55■■■□□ 2.16
CCDC85B-201ENST00000312579 TRAPPC3LQ5T215 181 aa28.55■■■□□ 2.16
CCDC85B-201ENST00000312579 CLUAP1Q96AJ1 413 aa28.55■■■□□ 2.16
CCDC85B-201ENST00000312579 SRP68Q9UHB9 627 aaKnown RBP28.55■■■□□ 2.16
CCDC85B-201ENST00000312579 FKBP8Q14318 412 aa28.54■■■□□ 2.16
CCDC85B-201ENST00000312579 ATF7IPQ6VMQ6 1270 aa28.54■■■□□ 2.16
CCDC85B-201ENST00000312579 ANKRD13DQ6ZTN6 518 aa28.54■■■□□ 2.16
CCDC85B-201ENST00000312579 IPO8O15397 1037 aaKnown RBP28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 KIF6Q6ZMV9 814 aa28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 MAP3K2Q9Y2U5 619 aa28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 SSFA2P28290 1259 aa28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 C20orf194Q5TEA3 1177 aa28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 KSR2Q6VAB6 950 aa28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 RIC3Q7Z5B4 369 aa28.53■■■□□ 2.16
CCDC85B-201ENST00000312579 RNF123Q5XPI4 1314 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 MAP3K15Q6ZN16 1313 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 PNPLA7Q6ZV29 1317 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 A0A087WZG4 1122 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 CAMTA2O94983 1202 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 DDX58O95786 925 aaKnown RBP28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 HLFQ16534 295 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 COL23A1Q86Y22 540 aaPredicted RBP28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 PLBD2Q8NHP8 589 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
CCDC85B-201ENST00000312579 RLBP1P12271 317 aa28.51■■■□□ 2.15
CCDC85B-201ENST00000312579 API5Q9BZZ5 524 aaKnown RBP28.51■■■□□ 2.15
CCDC85B-201ENST00000312579 C4AP0C0L4 1744 aa28.51■■■□□ 2.15
CCDC85B-201ENST00000312579 RFC4P35249 363 aa28.5■■■□□ 2.15
CCDC85B-201ENST00000312579 USPL1Q5W0Q7 1092 aa28.5■■■□□ 2.15
CCDC85B-201ENST00000312579 SLC4A10Q6U841 1118 aa28.5■■■□□ 2.15
CCDC85B-201ENST00000312579 MSH5O43196 834 aa28.49■■■□□ 2.15
CCDC85B-201ENST00000312579 ADRA2BP18089 450 aa28.49■■■□□ 2.15
CCDC85B-201ENST00000312579 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.49■■■□□ 2.15
CCDC85B-201ENST00000312579 PANK1Q8TE04 598 aa28.49■■■□□ 2.15
CCDC85B-201ENST00000312579 DNAAF4Q8WXU2 420 aa28.48■■■□□ 2.15
CCDC85B-201ENST00000312579 NARFQ9UHQ1 456 aa28.48■■■□□ 2.15
CCDC85B-201ENST00000312579 PDGFDQ9GZP0 370 aaPredicted RBP28.48■■■□□ 2.15
CCDC85B-201ENST00000312579 ARFGEF2Q9Y6D5 1785 aa28.47■■■□□ 2.15
CCDC85B-201ENST00000312579 USP42Q9H9J4 1324 aaKnown RBP28.47■■■□□ 2.15
CCDC85B-201ENST00000312579 ZPR1O75312 459 aa28.47■■■□□ 2.15
CCDC85B-201ENST00000312579 BCL2L12Q9HB09 334 aa28.47■■■□□ 2.15
CCDC85B-201ENST00000312579 IRX6P78412 446 aaPredicted RBP28.46■■■□□ 2.15
CCDC85B-201ENST00000312579 DZIP1LQ8IYY4 767 aaKnown RBP28.46■■■□□ 2.15
CCDC85B-201ENST00000312579 MYD88Q99836 296 aa28.46■■■□□ 2.15
CCDC85B-201ENST00000312579 ABCC4O15439 1325 aa28.46■■■□□ 2.15
CCDC85B-201ENST00000312579 ERVV-1B6SEH8 477 aa28.45■■■□□ 2.15
CCDC85B-201ENST00000312579 FTSJ3Q8IY81 847 aaKnown RBP28.45■■■□□ 2.15
CCDC85B-201ENST00000312579 METTL22Q9BUU2 404 aaPredicted RBP28.45■■■□□ 2.15
CCDC85B-201ENST00000312579 ATP5J2-PTCD1G3V325 749 aa28.44■■■□□ 2.14
CCDC85B-201ENST00000312579 GIGYF2Q6Y7W6 1299 aaKnown RBP28.44■■■□□ 2.14
CCDC85B-201ENST00000312579 TMEM57Q8N5G2 664 aa28.44■■■□□ 2.14
CCDC85B-201ENST00000312579 BCORQ6W2J9 1755 aa28.44■■■□□ 2.14
CCDC85B-201ENST00000312579 SCN7AQ01118 1682 aa28.43■■■□□ 2.14
CCDC85B-201ENST00000312579 R3HDM1Q15032 1099 aaKnown RBP28.43■■■□□ 2.14
CCDC85B-201ENST00000312579 FLAD1Q8NFF5 587 aa28.43■■■□□ 2.14
CCDC85B-201ENST00000312579 IGKV5-2P06315 115 aa28.42■■■□□ 2.14
CCDC85B-201ENST00000312579 GYS1P13807 737 aa28.42■■■□□ 2.14
CCDC85B-201ENST00000312579 GPTP24298 496 aa28.42■■■□□ 2.14
CCDC85B-201ENST00000312579 CWF19L2Q2TBE0 894 aaKnown RBP28.42■■■□□ 2.14
CCDC85B-201ENST00000312579 BEND3Q5T5X7 828 aa28.42■■■□□ 2.14
CCDC85B-201ENST00000312579 NUP98P52948 1817 aa28.42■■■□□ 2.14
CCDC85B-201ENST00000312579 TCIRG1Q13488 830 aa28.41■■■□□ 2.14
CCDC85B-201ENST00000312579 QSER1Q2KHR3 1735 aa28.41■■■□□ 2.14
CCDC85B-201ENST00000312579 BICDL1Q6ZP65 573 aa28.4■■■□□ 2.14
CCDC85B-201ENST00000312579 COG6Q9Y2V7 657 aa28.4■■■□□ 2.14
CCDC85B-201ENST00000312579 PSDA5PKW4 1024 aaPredicted RBP28.39■■■□□ 2.14
CCDC85B-201ENST00000312579 PDE3AQ14432 1141 aa28.39■■■□□ 2.14
CCDC85B-201ENST00000312579 TBC1D9BQ66K14 1250 aa28.39■■■□□ 2.14
CCDC85B-201ENST00000312579 NEXNQ0ZGT2 675 aa28.38■■■□□ 2.13
CCDC85B-201ENST00000312579 MSL1Q68DK7 614 aa28.38■■■□□ 2.13
CCDC85B-201ENST00000312579 INTS3Q68E01 1043 aaKnown RBP28.38■■■□□ 2.13
CCDC85B-201ENST00000312579 ISCA1Q9BUE6 129 aa28.38■■■□□ 2.13
CCDC85B-201ENST00000312579 SRCIN1Q9C0H9 1055 aa28.38■■■□□ 2.13
CCDC85B-201ENST00000312579 ZNF652Q9Y2D9 606 aa28.38■■■□□ 2.13
CCDC85B-201ENST00000312579 CLEC4GQ6UXB4 293 aa28.37■■■□□ 2.13
CCDC85B-201ENST00000312579 ITPRIPQ8IWB1 547 aa28.37■■■□□ 2.13
CCDC85B-201ENST00000312579 LINS1Q8NG48 757 aa28.37■■■□□ 2.13
CCDC85B-201ENST00000312579 PXDNLA1KZ92 1463 aa28.37■■■□□ 2.13
CCDC85B-201ENST00000312579 NEURL1BA8MQ27 555 aa28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 MS4A1P11836 297 aa28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 CCT4P50991 539 aaKnown RBP28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 ZNF34Q8IZ26 560 aa28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 NIP7Q9Y221 180 aaKnown RBP eCLIP28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 UBN2Q6ZU65 1347 aa28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 ATP10DQ9P241 1426 aa28.36■■■□□ 2.13
CCDC85B-201ENST00000312579 HSP90AB3PQ58FF7 597 aa28.35■■■□□ 2.13
CCDC85B-201ENST00000312579 ERICH6BQ5W0A0 696 aa28.35■■■□□ 2.13
CCDC85B-201ENST00000312579 CRBNQ96SW2 442 aa28.35■■■□□ 2.13
CCDC85B-201ENST00000312579 FAM177BA6PVY3 158 aa28.34■■■□□ 2.13
CCDC85B-201ENST00000312579 JARID2Q92833 1246 aaPredicted RBP28.34■■■□□ 2.13
CCDC85B-201ENST00000312579 ANKRD36CQ5JPF3 1778 aa28.33■■■□□ 2.13
CCDC85B-201ENST00000312579 MVPQ14764 893 aaKnown RBP28.33■■■□□ 2.13
CCDC85B-201ENST00000312579 NFIXQ14938 502 aa28.33■■■□□ 2.13
CCDC85B-201ENST00000312579 NLRP10Q86W26 655 aa28.33■■■□□ 2.13
CCDC85B-201ENST00000312579 AFDNP55196 1824 aaKnown RBP28.32■■■□□ 2.12
CCDC85B-201ENST00000312579 RGL2O15211 777 aa28.31■■■□□ 2.12
CCDC85B-201ENST00000312579 ALDH1L1O75891 902 aa28.31■■■□□ 2.12
CCDC85B-201ENST00000312579 SUSD4Q5VX71 490 aa28.31■■■□□ 2.12
CCDC85B-201ENST00000312579 CWC25Q9NXE8 425 aaPredicted RBP28.31■■■□□ 2.12
CCDC85B-201ENST00000312579 N4BP2Q86UW6 1770 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms