RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 IMPACTQ9P2X3 320 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 USO1O60763 962 aaKnown RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 EXOSC9Q06265 439 aaKnown RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 ARHGAP29Q52LW3 1261 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 CTCFLQ8NI51 663 aaPredicted RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 RPGRIP1Q96KN7 1286 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 DNAJC2Q99543 621 aaKnown RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 SYCP1Q15431 976 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 KIAA0232Q92628 1395 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 POTEJP0CG39 1038 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 ALS2CR12Q96Q35 445 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 RAB3GAP1Q15042 981 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 SPATS2Q86XZ4 545 aaKnown RBP10.23□□□□□ -0.77
COL6A5-202ENST00000312481 ZKSCAN5Q9Y2L8 839 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 MED14O60244 1454 aa10.23□□□□□ -0.77
COL6A5-202ENST00000312481 GABPB1Q06547 395 aaPredicted RBP10.23□□□□□ -0.77
COL6A5-202ENST00000312481 DBF4Q9UBU7 674 aaPredicted RBP10.23□□□□□ -0.77
COL6A5-202ENST00000312481 GTF2F1P35269 517 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL6A5-202ENST00000312481 CT47A1Q5JQC4 288 aaPredicted RBP10.23□□□□□ -0.77
COL6A5-202ENST00000312481 APPP05067 770 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 TRIM14Q14142 442 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 TAF7Q15545 349 aaPredicted RBP10.22□□□□□ -0.77
COL6A5-202ENST00000312481 MBD5Q9P267 1494 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 BRAPQ7Z569 592 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 CNNM2Q9H8M5 875 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 A0A087WZG4 1122 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
COL6A5-202ENST00000312481 MYZAPP0CAP1 466 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL6A5-202ENST00000312481 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
COL6A5-202ENST00000312481 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 TAOK2Q9UL54 1235 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
COL6A5-202ENST00000312481 CCDC181Q5TID7 509 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 BCL2L13Q9BXK5 485 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 ZNF652Q9Y2D9 606 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 DISP1Q96F81 1524 aa10.22□□□□□ -0.77
COL6A5-202ENST00000312481 ZNF445P59923 1031 aa10.21□□□□□ -0.77
COL6A5-202ENST00000312481 TTC22Q5TAA0 569 aa10.21□□□□□ -0.77
COL6A5-202ENST00000312481 ALDH1L1O75891 902 aa10.21□□□□□ -0.77
COL6A5-202ENST00000312481 TSGA10Q9BZW7 698 aa10.21□□□□□ -0.77
COL6A5-202ENST00000312481 ATF3P18847 181 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 PPP2R5EQ16537 467 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 FKBP15Q5T1M5 1219 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 STXBP4Q6ZWJ1 553 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 TIGD1Q96MW7 591 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 KIF5BP33176 963 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 RIMS2Q9UQ26 1411 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 SLC4A2P04920 1241 aa10.21□□□□□ -0.78
COL6A5-202ENST00000312481 SMAP1Q8IYB5 467 aaPredicted RBP10.2□□□□□ -0.78
COL6A5-202ENST00000312481 ARFGAP3Q9NP61 516 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 STX6O43752 255 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 CETN1Q12798 172 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 CCDC91Q7Z6B0 441 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 CCDC50Q8IVM0 306 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 G3V3G9 751 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 FIBPO43427 364 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 DCAF8Q5TAQ9 597 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 TTC12Q9H892 705 aaPredicted RBP10.2□□□□□ -0.78
COL6A5-202ENST00000312481 USP37Q86T82 979 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 EFCAB6Q5THR3 1501 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 CCDC69A6NI79 296 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 SPA17Q15506 151 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 CFAP70Q5T0N1 1121 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 TOMM22Q9NS69 142 aa10.2□□□□□ -0.78
COL6A5-202ENST00000312481 BAG4O95429 457 aaKnown RBP10.19□□□□□ -0.78
COL6A5-202ENST00000312481 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
COL6A5-202ENST00000312481 NPATQ14207 1427 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 SPECC1LQ69YQ0 1117 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 ARFGAP2Q8N6H7 521 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 GNAT2P19087 354 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 SSH1Q8WYL5 1049 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 TNPO1Q92973 898 aaKnown RBP10.19□□□□□ -0.78
COL6A5-202ENST00000312481 PRAM1Q96QH2 718 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 GLT8D2Q9H1C3 349 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 TRIM27P14373 513 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 VPS53Q5VIR6 699 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 PAFAH1B1P43034 410 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 YEATS4O95619 227 aa10.19□□□□□ -0.78
COL6A5-202ENST00000312481 CEP126Q9P2H0 1117 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 SRGAP3O43295 1099 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 TMEM57Q8N5G2 664 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 ADGRL3Q9HAR2 1447 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 ANKRD44Q8N8A2 993 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 UGGT1Q9NYU2 1555 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 GNAQP50148 359 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 ECHDC1Q9NTX5 307 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 TTC14Q96N46 770 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 TSG101Q99816 390 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
COL6A5-202ENST00000312481 FLT4P35916 1363 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 EHMT1Q9H9B1 1298 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 AXDND1Q5T1B0 1012 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms