RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SCN7AQ01118 1682 aa15.67■□□□□ 0.1
SCFD1-201ENST00000311943 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
SCFD1-201ENST00000311943 SERPINB2P05120 415 aa15.67■□□□□ 0.1
SCFD1-201ENST00000311943 COPS6Q7L5N1 327 aa15.67■□□□□ 0.1
SCFD1-201ENST00000311943 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
SCFD1-201ENST00000311943 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
SCFD1-201ENST00000311943 GPTP24298 496 aa15.66■□□□□ 0.1
SCFD1-201ENST00000311943 XAGE3Q8WTP9 111 aa15.66■□□□□ 0.1
SCFD1-201ENST00000311943 ZNF521Q96K83 1311 aa15.66■□□□□ 0.1
SCFD1-201ENST00000311943 BCORQ6W2J9 1755 aa15.65■□□□□ 0.1
SCFD1-201ENST00000311943 HMGB2P26583 209 aaKnown RBP15.65■□□□□ 0.1
SCFD1-201ENST00000311943 EXOSC9Q06265 439 aaKnown RBP15.65■□□□□ 0.1
SCFD1-201ENST00000311943 KIAA1551Q9HCM1 1747 aa15.64■□□□□ 0.09
SCFD1-201ENST00000311943 DPEP1P16444 411 aa15.64■□□□□ 0.09
SCFD1-201ENST00000311943 A0A087WZG4 1122 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 KCNA3P22001 575 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
SCFD1-201ENST00000311943 UBN2Q6ZU65 1347 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 PRR5LQ6MZQ0 368 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 C10orf71Q711Q0 1435 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 G2E3Q7L622 706 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 NIP7Q9Y221 180 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCFD1-201ENST00000311943 CD2APQ9Y5K6 639 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 MAP3K15Q6ZN16 1313 aa15.63■□□□□ 0.09
SCFD1-201ENST00000311943 DDX21Q9NR30 783 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCFD1-201ENST00000311943 TWISTNBQ3B726 338 aaPredicted RBP15.61■□□□□ 0.09
SCFD1-201ENST00000311943 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
SCFD1-201ENST00000311943 GPR162Q16538 588 aa15.61■□□□□ 0.09
SCFD1-201ENST00000311943 WDR63Q8IWG1 891 aa15.61■□□□□ 0.09
SCFD1-201ENST00000311943 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
SCFD1-201ENST00000311943 NUP98P52948 1817 aa15.61■□□□□ 0.09
SCFD1-201ENST00000311943 SUSD4Q5VX71 490 aa15.6■□□□□ 0.09
SCFD1-201ENST00000311943 NRXN2Q9P2S2 1712 aa15.59■□□□□ 0.09
SCFD1-201ENST00000311943 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
SCFD1-201ENST00000311943 ANKRD31Q8N7Z5 1873 aa15.59■□□□□ 0.09
SCFD1-201ENST00000311943 ATP5J2-PTCD1G3V325 749 aa15.59■□□□□ 0.09
SCFD1-201ENST00000311943 VAMP4O75379 141 aa15.59■□□□□ 0.09
SCFD1-201ENST00000311943 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.09
SCFD1-201ENST00000311943 KIF6Q6ZMV9 814 aa15.58■□□□□ 0.09
SCFD1-201ENST00000311943 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.09
SCFD1-201ENST00000311943 DBF4Q9UBU7 674 aaPredicted RBP15.58■□□□□ 0.09
SCFD1-201ENST00000311943 IL16Q14005 1332 aa15.58■□□□□ 0.09
SCFD1-201ENST00000311943 GIGYF2Q6Y7W6 1299 aaKnown RBP15.58■□□□□ 0.08
SCFD1-201ENST00000311943 C3orf67Q6ZVT6 689 aa15.58■□□□□ 0.08
SCFD1-201ENST00000311943 ABCC12Q96J65 1359 aa15.58■□□□□ 0.08
SCFD1-201ENST00000311943 BCS1LQ9Y276 419 aa15.57■□□□□ 0.08
SCFD1-201ENST00000311943 ERBB4Q15303 1308 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
SCFD1-201ENST00000311943 ZNF34Q8IZ26 560 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
SCFD1-201ENST00000311943 ERVV-1B6SEH8 477 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 HOXB7P09629 217 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 CNBD1Q8NA66 436 aa15.56■□□□□ 0.08
SCFD1-201ENST00000311943 COL11A2P13942 1736 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-201ENST00000311943 NPHP1O15259 732 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCFD1-201ENST00000311943 SLFN5Q08AF3 891 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 TNRC6CQ9HCJ0 1690 aaKnown RBP15.55■□□□□ 0.08
SCFD1-201ENST00000311943 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
SCFD1-201ENST00000311943 OLFM4Q6UX06 510 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 ZNF652Q9Y2D9 606 aa15.55■□□□□ 0.08
SCFD1-201ENST00000311943 TGFB2P61812 414 aa15.54■□□□□ 0.08
SCFD1-201ENST00000311943 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
SCFD1-201ENST00000311943 BRCA1P38398 1863 aaKnown RBP15.53■□□□□ 0.08
SCFD1-201ENST00000311943 NTSR2O95665 410 aa15.53■□□□□ 0.08
SCFD1-201ENST00000311943 NLRP10Q86W26 655 aa15.53■□□□□ 0.08
SCFD1-201ENST00000311943 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
SCFD1-201ENST00000311943 TCIRG1Q13488 830 aa15.52■□□□□ 0.08
SCFD1-201ENST00000311943 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
SCFD1-201ENST00000311943 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.083e-6■□□□□ 8.1
SCFD1-201ENST00000311943 MYD88Q99836 296 aa15.52■□□□□ 0.08
SCFD1-201ENST00000311943 ATP10DQ9P241 1426 aa15.52■□□□□ 0.08
SCFD1-201ENST00000311943 ADCY9O60503 1353 aa15.52■□□□□ 0.07
SCFD1-201ENST00000311943 PI4KAP2A4QPH2 592 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 F6X3S4 739 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
SCFD1-201ENST00000311943 RIC3Q7Z5B4 369 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 PI4KAP1Q8N8J0 262 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 MYH16Q9H6N6 1097 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 MAP3K2Q9Y2U5 619 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 ARFGEF2Q9Y6D5 1785 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 FAM89AQ96GI7 184 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
SCFD1-201ENST00000311943 GTF2E1P29083 439 aaPredicted RBP15.5■□□□□ 0.07
SCFD1-201ENST00000311943 CWF19L2Q2TBE0 894 aaKnown RBP15.5■□□□□ 0.07
SCFD1-201ENST00000311943 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
SCFD1-201ENST00000311943 PIM2Q9P1W9 311 aa15.5■□□□□ 0.07
SCFD1-201ENST00000311943 CACNA1SQ13698 1873 aa15.5■□□□□ 0.07
SCFD1-201ENST00000311943 SRGNP10124 158 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms