RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 MBD3O95983 291 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 IFIT2P09913 472 aaKnown RBP30.57■■■□□ 2.48
HOXB3-201ENST00000311626 ARHGEF25Q86VW2 580 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 SUCLG2Q96I99 432 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 CCDC8Q9H0W5 538 aaPredicted RBP30.57■■■□□ 2.48
HOXB3-201ENST00000311626 CNPY2Q9Y2B0 182 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 GLRX3O76003 335 aaKnown RBP30.57■■■□□ 2.48
HOXB3-201ENST00000311626 HSP90AB4PQ58FF6 505 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 KSR2Q6VAB6 950 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 KLHDC4Q8TBB5 520 aa30.57■■■□□ 2.48
HOXB3-201ENST00000311626 TRHP20396 242 aaPredicted RBP30.56■■■□□ 2.48
HOXB3-201ENST00000311626 JARID2Q92833 1246 aaPredicted RBP30.56■■■□□ 2.48
HOXB3-201ENST00000311626 KDM3BQ7LBC6 1761 aa30.56■■■□□ 2.48
HOXB3-201ENST00000311626 MSNP26038 577 aaKnown RBP30.55■■■□□ 2.48
HOXB3-201ENST00000311626 COL9A3Q14050 684 aaPredicted RBP30.55■■■□□ 2.48
HOXB3-201ENST00000311626 USP54Q70EL1 1684 aa30.55■■■□□ 2.48
HOXB3-201ENST00000311626 WDR33Q9C0J8 1336 aaKnown RBP30.55■■■□□ 2.48
HOXB3-201ENST00000311626 ZC3H6P61129 1189 aaKnown RBP30.55■■■□□ 2.48
HOXB3-201ENST00000311626 ECHDC1Q9NTX5 307 aa30.55■■■□□ 2.48
HOXB3-201ENST00000311626 AMOTQ4VCS5 1084 aa30.54■■■□□ 2.48
HOXB3-201ENST00000311626 KAZALD1Q96I82 304 aa30.54■■■□□ 2.48
HOXB3-201ENST00000311626 PIP4K2AP48426 406 aaPredicted RBP30.54■■■□□ 2.48
HOXB3-201ENST00000311626 JAKMIP1Q96N16 626 aaKnown RBP30.54■■■□□ 2.48
HOXB3-201ENST00000311626 BICC1Q9H694 974 aaKnown RBP30.54■■■□□ 2.48
HOXB3-201ENST00000311626 TLR7Q9NYK1 1049 aaKnown RBP30.54■■■□□ 2.48
HOXB3-201ENST00000311626 TCHHQ07283 1943 aa30.54■■■□□ 2.48
HOXB3-201ENST00000311626 MYL6BP14649 208 aa30.53■■■□□ 2.48
HOXB3-201ENST00000311626 CCDC83Q8IWF9 413 aa30.53■■■□□ 2.48
HOXB3-201ENST00000311626 LIMCH1Q9UPQ0 1083 aa30.53■■■□□ 2.48
HOXB3-201ENST00000311626 FAM227BQ96M60 508 aa30.52■■■□□ 2.48
HOXB3-201ENST00000311626 MPNDQ8N594 471 aa30.52■■■□□ 2.48
HOXB3-201ENST00000311626 TTC41PQ6P2S7 1318 aa30.52■■■□□ 2.48
HOXB3-201ENST00000311626 SYT1P21579 422 aa30.51■■■□□ 2.48
HOXB3-201ENST00000311626 PDLIM2Q96JY6 352 aa30.51■■■□□ 2.48
HOXB3-201ENST00000311626 SASH1O94885 1247 aa30.51■■■□□ 2.47
HOXB3-201ENST00000311626 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.51■■■□□ 2.47
HOXB3-201ENST00000311626 MTX1Q13505 466 aa30.5■■■□□ 2.47
HOXB3-201ENST00000311626 EAF2Q96CJ1 260 aaPredicted RBP30.5■■■□□ 2.47
HOXB3-201ENST00000311626 ALDH1L1O75891 902 aa30.49■■■□□ 2.47
HOXB3-201ENST00000311626 SMC3Q9UQE7 1217 aa30.49■■■□□ 2.47
HOXB3-201ENST00000311626 TSPY26PQ9H489 355 aa30.49■■■□□ 2.47
HOXB3-201ENST00000311626 HYPKQ9NX55 129 aa30.49■■■□□ 2.47
HOXB3-201ENST00000311626 USP42Q9H9J4 1324 aaKnown RBP30.49■■■□□ 2.47
HOXB3-201ENST00000311626 CHD2O14647 1828 aaKnown RBP30.49■■■□□ 2.47
HOXB3-201ENST00000311626 GRM8O00222 908 aa30.48■■■□□ 2.47
HOXB3-201ENST00000311626 NECAB1Q8N987 351 aa30.48■■■□□ 2.47
HOXB3-201ENST00000311626 STX6O43752 255 aa30.48■■■□□ 2.47
HOXB3-201ENST00000311626 ZSCAN22P10073 491 aaPredicted RBP30.48■■■□□ 2.47
HOXB3-201ENST00000311626 BOLA2Q9H3K6 86 aa30.48■■■□□ 2.47
HOXB3-201ENST00000311626 PDRG1Q9NUG6 133 aa30.48■■■□□ 2.47
HOXB3-201ENST00000311626 FIBPO43427 364 aa30.47■■■□□ 2.47
HOXB3-201ENST00000311626 TCEANC2Q96MN5 208 aa30.47■■■□□ 2.47
HOXB3-201ENST00000311626 ADGRL3Q9HAR2 1447 aa30.46■■■□□ 2.47
HOXB3-201ENST00000311626 PDIA6Q15084 440 aa30.46■■■□□ 2.47
HOXB3-201ENST00000311626 RIC3Q7Z5B4 369 aa30.46■■■□□ 2.47
HOXB3-201ENST00000311626 EPB41L2O43491 1005 aaKnown RBP30.46■■■□□ 2.47
HOXB3-201ENST00000311626 IGKV5-2P06315 115 aa30.46■■■□□ 2.47
HOXB3-201ENST00000311626 G3BP1Q13283 466 aaKnown RBP eCLIP30.46■■■□□ 2.47
HOXB3-201ENST00000311626 NMIQ13287 307 aaPredicted RBP30.46■■■□□ 2.47
HOXB3-201ENST00000311626 LMO7Q8WWI1 1683 aa30.46■■■□□ 2.47
HOXB3-201ENST00000311626 KCNJ4P48050 445 aa30.45■■■□□ 2.47
HOXB3-201ENST00000311626 RUFY2Q8WXA3 655 aa30.45■■■□□ 2.47
HOXB3-201ENST00000311626 DDX17Q92841 729 aaKnown RBP30.45■■■□□ 2.47
HOXB3-201ENST00000311626 CHMP4AQ9BY43 222 aa30.45■■■□□ 2.47
HOXB3-201ENST00000311626 LINS1Q8NG48 757 aa30.45■■■□□ 2.46
HOXB3-201ENST00000311626 GJB2P29033 226 aa30.44■■■□□ 2.46
HOXB3-201ENST00000311626 KRT28Q7Z3Y7 464 aa30.44■■■□□ 2.46
HOXB3-201ENST00000311626 EDC3Q96F86 508 aaKnown RBP30.44■■■□□ 2.46
HOXB3-201ENST00000311626 GPATCH3Q96I76 525 aa30.44■■■□□ 2.46
HOXB3-201ENST00000311626 EPHA10Q5JZY3 1008 aa30.43■■■□□ 2.46
HOXB3-201ENST00000311626 RBM8AQ9Y5S9 174 aaKnown RBP30.43■■■□□ 2.46
HOXB3-201ENST00000311626 TAF6LQ9Y6J9 622 aa30.43■■■□□ 2.46
HOXB3-201ENST00000311626 ST3GAL1Q11201 340 aa30.43■■■□□ 2.46
HOXB3-201ENST00000311626 EVI5LQ96CN4 794 aa30.43■■■□□ 2.46
HOXB3-201ENST00000311626 DDX21Q9NR30 783 aaKnown RBP eCLIP30.43■■■□□ 2.46
HOXB3-201ENST00000311626 NLRP2Q9NX02 1062 aa30.43■■■□□ 2.46
HOXB3-201ENST00000311626 NOL7Q9UMY1 257 aaKnown RBP30.43■■■□□ 2.46
HOXB3-201ENST00000311626 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.43■■■□□ 2.46
HOXB3-201ENST00000311626 NFATC2IPQ8NCF5 419 aa30.42■■■□□ 2.46
HOXB3-201ENST00000311626 NDUFB9Q9Y6M9 179 aa30.42■■■□□ 2.46
HOXB3-201ENST00000311626 HEG1Q9ULI3 1381 aa30.42■■■□□ 2.46
HOXB3-201ENST00000311626 ERC1Q8IUD2 1116 aa30.42■■■□□ 2.46
HOXB3-201ENST00000311626 SYAP1Q96A49 352 aaPredicted RBP30.42■■■□□ 2.46
HOXB3-201ENST00000311626 CYP46A1Q9Y6A2 500 aa30.42■■■□□ 2.46
HOXB3-201ENST00000311626 F13A1P00488 732 aa30.41■■■□□ 2.46
HOXB3-201ENST00000311626 ME3Q16798 604 aa30.41■■■□□ 2.46
HOXB3-201ENST00000311626 XAGE3Q8WTP9 111 aa30.41■■■□□ 2.46
HOXB3-201ENST00000311626 CCDC171Q6TFL3 1326 aa30.41■■■□□ 2.46
HOXB3-201ENST00000311626 A0A0D9SFI3 127 aa30.41■■■□□ 2.46
HOXB3-201ENST00000311626 MYD88Q99836 296 aa30.41■■■□□ 2.46
HOXB3-201ENST00000311626 NECTIN1Q15223 517 aa30.4■■■□□ 2.46
HOXB3-201ENST00000311626 CREB3L3Q68CJ9 461 aa30.4■■■□□ 2.46
HOXB3-201ENST00000311626 VPS37CA5D8V6 355 aaPredicted RBP30.4■■■□□ 2.46
HOXB3-201ENST00000311626 DNM1Q05193 864 aaKnown RBP30.4■■■□□ 2.46
HOXB3-201ENST00000311626 COPS6Q7L5N1 327 aa30.4■■■□□ 2.46
HOXB3-201ENST00000311626 DDX58O95786 925 aaKnown RBP30.39■■■□□ 2.46
HOXB3-201ENST00000311626 ZSWIM6Q9HCJ5 1215 aa30.39■■■□□ 2.46
HOXB3-201ENST00000311626 ZNF790Q6PG37 636 aa30.39■■■□□ 2.45
HOXB3-201ENST00000311626 FSD1Q9BTV5 496 aa30.39■■■□□ 2.45
HOXB3-201ENST00000311626 CHGBP05060 677 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms