RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 SUCLG2Q96I99 432 aa18.42■□□□□ 0.54
SPIRE1-201ENST00000309836 TTC14Q96N46 770 aa18.42■□□□□ 0.54
SPIRE1-201ENST00000309836 CWC27Q6UX04 472 aaKnown RBP18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 KAZALD1Q96I82 304 aa18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 TMEM63CQ9P1W3 806 aa18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 UTYO14607 1347 aa18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 ERBB3P21860 1342 aa18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 KDM6AO15550 1401 aaPredicted RBP18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 RBSNQ9H1K0 784 aa18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
SPIRE1-201ENST00000309836 SCN11AQ9UI33 1791 aa18.4■□□□□ 0.54
SPIRE1-201ENST00000309836 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
SPIRE1-201ENST00000309836 LINS1Q8NG48 757 aa18.4■□□□□ 0.54
SPIRE1-201ENST00000309836 ECHDC1Q9NTX5 307 aa18.4■□□□□ 0.54
SPIRE1-201ENST00000309836 RPAP1Q9BWH6 1393 aaPredicted RBP18.4■□□□□ 0.54
SPIRE1-201ENST00000309836 GRM8O00222 908 aa18.39■□□□□ 0.54
SPIRE1-201ENST00000309836 ERC1Q8IUD2 1116 aa18.39■□□□□ 0.54
SPIRE1-201ENST00000309836 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
SPIRE1-201ENST00000309836 TRIM44Q96DX7 344 aaPredicted RBP18.39■□□□□ 0.53
SPIRE1-201ENST00000309836 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.53
SPIRE1-201ENST00000309836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.39■□□□□ 0.53
SPIRE1-201ENST00000309836 AK2P54819 239 aa18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 PTH1RQ03431 593 aa18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 HDAC5Q9UQL6 1122 aa18.38■□□□□ 0.53
SPIRE1-201ENST00000309836 SASH1O94885 1247 aa18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 MBD3O95983 291 aa18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 AACSQ86V21 672 aa18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 DDX58O95786 925 aaKnown RBP18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 GPATCH3Q96I76 525 aa18.37■□□□□ 0.53
SPIRE1-201ENST00000309836 MEGF6O75095 1541 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 COL18A1P39060 1754 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 LRSAM1Q6UWE0 723 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 RUFY2Q8WXA3 655 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 KCNB2Q92953 911 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
SPIRE1-201ENST00000309836 WDR33Q9C0J8 1336 aaKnown RBP18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 CPA1P15085 419 aa18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 SYCE3A1L190 88 aa18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 PHKG2P15735 406 aa18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 EAF2Q96CJ1 260 aaPredicted RBP18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 ABCC6O95255 1503 aa18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 MRC1P22897 1456 aa18.35■□□□□ 0.53
SPIRE1-201ENST00000309836 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
SPIRE1-201ENST00000309836 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
SPIRE1-201ENST00000309836 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
SPIRE1-201ENST00000309836 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 GADD45BO75293 160 aaPredicted RBP18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 LARGE1O95461 756 aa18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 XAGE3Q8WTP9 111 aa18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.53
SPIRE1-201ENST00000309836 G3BP1Q13283 466 aaKnown RBP eCLIP18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 ADCK5Q3MIX3 580 aa18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 ANP32BQ92688 251 aaKnown RBP18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 CCDC8Q9H0W5 538 aaPredicted RBP18.33■□□□□ 0.52
SPIRE1-201ENST00000309836 MYL6BP14649 208 aa18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 EPHA10Q5JZY3 1008 aa18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 DDX17Q92841 729 aaKnown RBP18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 GDPD2Q9HCC8 539 aa18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 CCDC171Q6TFL3 1326 aa18.32■□□□□ 0.52
SPIRE1-201ENST00000309836 NMIQ13287 307 aaPredicted RBP18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 USP48Q86UV5 1035 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 PDLIM2Q96JY6 352 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 GCKRQ14397 625 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 TMEM87AQ8NBN3 555 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 SIL1Q9H173 461 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
SPIRE1-201ENST00000309836 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
SPIRE1-201ENST00000309836 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
SPIRE1-201ENST00000309836 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
SPIRE1-201ENST00000309836 MYD88Q99836 296 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms