RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
MUC4-201ENST00000308466 A0A087WZG4 1122 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 BICD2Q8TD16 824 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 GRM8O00222 908 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 TSPY26PQ9H489 355 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
MUC4-201ENST00000308466 HIP1O00291 1037 aa12.77□□□□□ -0.36
MUC4-201ENST00000308466 WASHC4Q2M389 1173 aa12.77□□□□□ -0.36
MUC4-201ENST00000308466 ZSCAN23Q3MJ62 389 aa12.77□□□□□ -0.36
MUC4-201ENST00000308466 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.36
MUC4-201ENST00000308466 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
MUC4-201ENST00000308466 NLRP1Q9C000 1473 aa12.77□□□□□ -0.37
MUC4-201ENST00000308466 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
MUC4-201ENST00000308466 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
MUC4-201ENST00000308466 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
MUC4-201ENST00000308466 PREX1Q8TCU6 1659 aa12.77□□□□□ -0.37
MUC4-201ENST00000308466 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
MUC4-201ENST00000308466 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
MUC4-201ENST00000308466 KIF2CQ99661 725 aa12.76□□□□□ -0.37
MUC4-201ENST00000308466 TNNT3P45378 269 aaPredicted RBP12.76□□□□□ -0.37
MUC4-201ENST00000308466 GNL2Q13823 731 aaKnown RBP12.76□□□□□ -0.37
MUC4-201ENST00000308466 GAS2L3Q86XJ1 694 aa12.76□□□□□ -0.37
MUC4-201ENST00000308466 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
MUC4-201ENST00000308466 LINS1Q8NG48 757 aa12.76□□□□□ -0.37
MUC4-201ENST00000308466 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 APPP05067 770 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 PRAMEF22A3QJZ6 481 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
MUC4-201ENST00000308466 ANAPC15P60006 121 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 EVI5LQ96CN4 794 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
MUC4-201ENST00000308466 SSH3Q8TE77 659 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 RICTORQ6R327 1708 aa12.75□□□□□ -0.37
MUC4-201ENST00000308466 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
MUC4-201ENST00000308466 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
MUC4-201ENST00000308466 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
MUC4-201ENST00000308466 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
MUC4-201ENST00000308466 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
MUC4-201ENST00000308466 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
MUC4-201ENST00000308466 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
MUC4-201ENST00000308466 AK2P54819 239 aa12.74□□□□□ -0.37
MUC4-201ENST00000308466 KDM4AO75164 1064 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 STX6O43752 255 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 NPHP1O15259 732 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 PDCP20941 246 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 GJB2P29033 226 aa12.73□□□□□ -0.37
MUC4-201ENST00000308466 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
MUC4-201ENST00000308466 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
MUC4-201ENST00000308466 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 ZSCAN31Q96LW9 406 aaPredicted RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 GIGYF1O75420 1035 aaPredicted RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 ZNF790Q6PG37 636 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 SGSM2O43147 1006 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 LMBRD1Q9NUN5 540 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 IBTKQ9P2D0 1353 aaPredicted RBP12.72□□□□□ -0.37
MUC4-201ENST00000308466 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
MUC4-201ENST00000308466 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
MUC4-201ENST00000308466 ZSCAN30Q86W11 494 aa12.71□□□□□ -0.37
MUC4-201ENST00000308466 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.37
MUC4-201ENST00000308466 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
MUC4-201ENST00000308466 OSBPL3Q9H4L5 887 aa12.71□□□□□ -0.37
MUC4-201ENST00000308466 KRT85P78386 507 aa12.71□□□□□ -0.37
MUC4-201ENST00000308466 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.37
MUC4-201ENST00000308466 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
MUC4-201ENST00000308466 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.38
MUC4-201ENST00000308466 CPLX1O14810 134 aa12.71□□□□□ -0.38
MUC4-201ENST00000308466 CHAF1AQ13111 956 aaPredicted RBP12.71□□□□□ -0.38
MUC4-201ENST00000308466 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.38
MUC4-201ENST00000308466 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.38
MUC4-201ENST00000308466 MYO5BQ9ULV0 1848 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 CAMK4Q16566 473 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 SNX14Q9Y5W7 946 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 CCDC57Q2TAC2 916 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
MUC4-201ENST00000308466 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 LRRC2Q9BYS8 371 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 HOXB7P09629 217 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
MUC4-201ENST00000308466 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms