RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ATP2B1P20020 1258 aa15.81■□□□□ 0.12
SEC23A-201ENST00000307712 CCT2P78371 535 aaKnown RBP15.81■□□□□ 0.12
SEC23A-201ENST00000307712 TAF3Q5VWG9 929 aa15.81■□□□□ 0.12
SEC23A-201ENST00000307712 CLEC17AQ6ZS10 378 aa15.81■□□□□ 0.12
SEC23A-201ENST00000307712 STK11IPQ8N1F8 1099 aa15.81■□□□□ 0.12
SEC23A-201ENST00000307712 LRRC2Q9BYS8 371 aa15.81■□□□□ 0.12
SEC23A-201ENST00000307712 PA2G4Q9UQ80 394 aaKnown RBP15.8■□□□□ 0.12
SEC23A-201ENST00000307712 SGSM2O43147 1006 aa15.8■□□□□ 0.12
SEC23A-201ENST00000307712 KRT222Q8N1A0 295 aa15.8■□□□□ 0.12
SEC23A-201ENST00000307712 TRPM2O94759 1503 aa15.8■□□□□ 0.12
SEC23A-201ENST00000307712 URI1O94763 535 aaPredicted RBP15.8■□□□□ 0.12
SEC23A-201ENST00000307712 PLEKHO1Q53GL0 409 aaPredicted RBP15.8■□□□□ 0.12
SEC23A-201ENST00000307712 NFXL1Q6ZNB6 911 aa15.8■□□□□ 0.12
SEC23A-201ENST00000307712 CCAR1Q8IX12 1150 aaKnown RBP15.8■□□□□ 0.12
SEC23A-201ENST00000307712 HSPA4P34932 840 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 TMCO3Q6UWJ1 677 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
SEC23A-201ENST00000307712 PYCARDQ9ULZ3 195 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 NLRP1Q9C000 1473 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 SMTNL1A8MU46 457 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 KIF2AO00139 706 aaPredicted RBP15.79■□□□□ 0.12
SEC23A-201ENST00000307712 NEMFO60524 1076 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 STX1AQ16623 288 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 TTC21BQ7Z4L5 1316 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
SEC23A-201ENST00000307712 CFAP100Q494V2 611 aa15.79■□□□□ 0.12
SEC23A-201ENST00000307712 TPM1P09493 284 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 LRMPQ12912 555 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 TMC6Q7Z403 805 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 ABCC1P33527 1531 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 CCP110O43303 1012 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 SNW1Q13573 536 aaKnown RBP15.78■□□□□ 0.12
SEC23A-201ENST00000307712 BRF1Q92994 677 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 YTHDC2Q9H6S0 1430 aaKnown RBP15.78■□□□□ 0.12
SEC23A-201ENST00000307712 CUL4AQ13619 759 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 RAD50Q92878 1312 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 CROCC2H7BZ55 1655 aa15.78■□□□□ 0.12
SEC23A-201ENST00000307712 ISM2Q6H9L7 571 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 FEZ1Q99689 392 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 OGFRQ9NZT2 677 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 NPATQ14207 1427 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 CTAGE5O15320 804 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 CBX8Q9HC52 389 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 CHPF2Q9P2E5 772 aa15.77■□□□□ 0.12
SEC23A-201ENST00000307712 HOOK1Q9UJC3 728 aaKnown RBP15.77■□□□□ 0.12
SEC23A-201ENST00000307712 CREB3L3Q68CJ9 461 aa15.77■□□□□ 0.11
SEC23A-201ENST00000307712 MPRIPQ6WCQ1 1025 aa15.77■□□□□ 0.11
SEC23A-201ENST00000307712 GTF2F1P35269 517 aaKnown RBP eCLIP15.76■□□□□ 0.115e-8■■■■□ 22.6
SEC23A-201ENST00000307712 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 MAP3K2Q9Y2U5 619 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 CCDC171Q6TFL3 1326 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 KIF20AO95235 890 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
SEC23A-201ENST00000307712 NMIQ13287 307 aaPredicted RBP15.76■□□□□ 0.11
SEC23A-201ENST00000307712 NEK1Q96PY6 1258 aa15.76■□□□□ 0.11
SEC23A-201ENST00000307712 CCDC69A6NI79 296 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 DHX16O60231 1041 aaKnown RBP15.75■□□□□ 0.11
SEC23A-201ENST00000307712 SKIDA1Q1XH10 827 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 RUFY3Q7L099 469 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 LARP1Q6PKG0 1096 aaKnown RBP15.75■□□□□ 0.11
SEC23A-201ENST00000307712 TMX1Q9H3N1 280 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 CAVIN2O95810 425 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 LIG1P18858 919 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 RASEFQ8IZ41 740 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 AOPEPQ8N6M6 819 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
SEC23A-201ENST00000307712 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
SEC23A-201ENST00000307712 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 E9PCH4 1651 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 GSDMDP57764 484 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 CDC37L1Q7L3B6 337 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
SEC23A-201ENST00000307712 NLRP2Q9NX02 1062 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 CALCOCO1Q9P1Z2 691 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 MYOM2P54296 1465 aa15.74■□□□□ 0.11
SEC23A-201ENST00000307712 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
SEC23A-201ENST00000307712 POLR3DP05423 398 aaPredicted RBP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 BMS1Q14692 1282 aaKnown RBP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 SAFBQ15424 915 aaKnown RBP eCLIP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 OSBPL3Q9H4L5 887 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 CWC15Q9P013 229 aaKnown RBP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 MTMR6Q9Y217 621 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 USP16Q9Y5T5 823 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 SLU7O95391 586 aaKnown RBP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 ZNF75DP51815 510 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 TSR1Q2NL82 804 aaKnown RBP15.73■□□□□ 0.11
SEC23A-201ENST00000307712 EYA1Q99502 592 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 NCOA3Q9Y6Q9 1424 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 PREX2Q70Z35 1606 aa15.73■□□□□ 0.11
SEC23A-201ENST00000307712 ZNF397Q8NF99 534 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms