RNA–Protein interactions for RNA: ENST00000306077.4

TMEM43-201, Transcript of transmembrane protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM43, Length 3,341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43-201ENST00000306077 TSPY26PQ9H489 355 aa10.66□□□□□ -0.7
TMEM43-201ENST00000306077 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 IL25Q9H293 177 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 CCDC9Q9Y3X0 531 aaKnown RBP10.65□□□□□ -0.7
TMEM43-201ENST00000306077 LRRFIP2Q9Y608 721 aaKnown RBP10.65□□□□□ -0.7
TMEM43-201ENST00000306077 RAD50Q92878 1312 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 KCNJ4P48050 445 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 LRSAM1Q6UWE0 723 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 TTC14Q96N46 770 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
TMEM43-201ENST00000306077 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
TMEM43-201ENST00000306077 USP48Q86UV5 1035 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
TMEM43-201ENST00000306077 PLEKHG2Q9H7P9 1386 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 HCLS1P14317 486 aaPredicted RBP10.64□□□□□ -0.71
TMEM43-201ENST00000306077 TERF1P54274 439 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 EIF4A1P60842 406 aaKnown RBP10.64□□□□□ -0.71
TMEM43-201ENST00000306077 IP6K1Q92551 441 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 PDCL3Q9H2J4 239 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 CNPY2Q9Y2B0 182 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 LAMA4Q16363 1823 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 DDX60Q8IY21 1712 aaKnown RBP10.64□□□□□ -0.71
TMEM43-201ENST00000306077 JCADQ9P266 1359 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 MBD3O95983 291 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 BEND3Q5T5X7 828 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
TMEM43-201ENST00000306077 USHBP1Q8N6Y0 703 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 NUP188Q5SRE5 1749 aa10.64□□□□□ -0.71
TMEM43-201ENST00000306077 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 SNRKQ9NRH2 765 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 SETD1BQ9UPS6 1966 aaKnown RBP10.63□□□□□ -0.71
TMEM43-201ENST00000306077 SGSM2O43147 1006 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 FOSBP53539 338 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
TMEM43-201ENST00000306077 LSG1Q9H089 658 aaKnown RBP10.63□□□□□ -0.71
TMEM43-201ENST00000306077 CCDC39Q9UFE4 941 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 ZKSCAN5Q9Y2L8 839 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 UTYO14607 1347 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 UBR2Q8IWV8 1755 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 ZNF500O60304 480 aaPredicted RBP10.63□□□□□ -0.71
TMEM43-201ENST00000306077 GIMAP6Q6P9H5 292 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 TCEANC2Q96MN5 208 aa10.63□□□□□ -0.71
TMEM43-201ENST00000306077 ZHX1Q9UKY1 873 aaPredicted RBP10.63□□□□□ -0.71
TMEM43-201ENST00000306077 PAPPAQ13219 1627 aa10.62□□□□□ -0.71
TMEM43-201ENST00000306077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.62□□□□□ -0.711e-5■□□□□ 10.5
TMEM43-201ENST00000306077 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
TMEM43-201ENST00000306077 IGSF3O75054 1194 aa10.62□□□□□ -0.71
TMEM43-201ENST00000306077 NLRP6P59044 892 aa10.62□□□□□ -0.71
TMEM43-201ENST00000306077 CAMK4Q16566 473 aa10.62□□□□□ -0.71
TMEM43-201ENST00000306077 ANKLE2Q86XL3 938 aa10.62□□□□□ -0.71
TMEM43-201ENST00000306077 NOL7Q9UMY1 257 aaKnown RBP10.62□□□□□ -0.71
TMEM43-201ENST00000306077 TJP1Q07157 1748 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 PPFIA3O75145 1194 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 UBTFL1P0CB47 393 aaPredicted RBP10.61□□□□□ -0.71
TMEM43-201ENST00000306077 KCNA6P17658 529 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 DRC7Q8IY82 874 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 SYAP1Q96A49 352 aaPredicted RBP10.61□□□□□ -0.71
TMEM43-201ENST00000306077 CBX1P83916 185 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 PPP1R42Q7Z4L9 355 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 CCDC83Q8IWF9 413 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
TMEM43-201ENST00000306077 RBM33Q96EV2 1170 aaKnown RBP10.61□□□□□ -0.71
TMEM43-201ENST00000306077 PHAXQ9H814 394 aaKnown RBP10.61□□□□□ -0.71
TMEM43-201ENST00000306077 HDGFL1Q5TGJ6 251 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 NECAB1Q8N987 351 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 KIF1BPQ96EK5 621 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 ADCY5O95622 1261 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 MCM5P33992 734 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 SMC3Q9UQE7 1217 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 SNX14Q9Y5W7 946 aa10.6□□□□□ -0.71
TMEM43-201ENST00000306077 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
TMEM43-201ENST00000306077 SRGAP3O43295 1099 aa10.59□□□□□ -0.71
TMEM43-201ENST00000306077 STK3Q13188 491 aa10.59□□□□□ -0.71
TMEM43-201ENST00000306077 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
TMEM43-201ENST00000306077 NAP1L2Q9ULW6 460 aaPredicted RBP10.59□□□□□ -0.71
TMEM43-201ENST00000306077 COL15A1P39059 1388 aa10.59□□□□□ -0.71
TMEM43-201ENST00000306077 NBPF6Q5VWK0 638 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 NBPF4Q96M43 638 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.72
TMEM43-201ENST00000306077 ALDH1L1O75891 902 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 NBPF7P0C2Y1 421 aaPredicted RBP10.58□□□□□ -0.72
TMEM43-201ENST00000306077 CASTP20810 708 aaKnown RBP10.58□□□□□ -0.72
TMEM43-201ENST00000306077 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 TM6SF1Q9BZW5 370 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
TMEM43-201ENST00000306077 SPEF2Q9C093 1822 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 CEBPZQ03701 1054 aaKnown RBP10.58□□□□□ -0.72
TMEM43-201ENST00000306077 HSP90AB4PQ58FF6 505 aa10.58□□□□□ -0.72
TMEM43-201ENST00000306077 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
TMEM43-201ENST00000306077 CKAP2LQ8IYA6 745 aa10.57□□□□□ -0.72
TMEM43-201ENST00000306077 ABTB2Q8N961 1025 aa10.57□□□□□ -0.72
TMEM43-201ENST00000306077 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
TMEM43-201ENST00000306077 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
TMEM43-201ENST00000306077 DNM1Q05193 864 aaKnown RBP10.57□□□□□ -0.72
TMEM43-201ENST00000306077 PRPF40BQ6NWY9 871 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms