RNA–Protein interactions for RNA: ENST00000305586.11

FXR1-201, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5 BASIC

Gene FXR1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-201ENST00000305586 AK9Q5TCS8 1911 aa13.77□□□□□ -0.21
FXR1-201ENST00000305586 ST18O60284 1047 aa13.77□□□□□ -0.21
FXR1-201ENST00000305586 RAB3GAP1Q15042 981 aa13.77□□□□□ -0.21
FXR1-201ENST00000305586 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
FXR1-201ENST00000305586 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
FXR1-201ENST00000305586 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
FXR1-201ENST00000305586 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
FXR1-201ENST00000305586 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
FXR1-201ENST00000305586 IL25Q9H293 177 aa13.76□□□□□ -0.21
FXR1-201ENST00000305586 GCKRQ14397 625 aa13.75□□□□□ -0.21
FXR1-201ENST00000305586 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
FXR1-201ENST00000305586 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
FXR1-201ENST00000305586 MCCP23508 829 aa13.75□□□□□ -0.21
FXR1-201ENST00000305586 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
FXR1-201ENST00000305586 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
FXR1-201ENST00000305586 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
FXR1-201ENST00000305586 TTC41PQ6P2S7 1318 aa13.74□□□□□ -0.21
FXR1-201ENST00000305586 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
FXR1-201ENST00000305586 IL2RBP14784 551 aa13.74□□□□□ -0.21
FXR1-201ENST00000305586 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
FXR1-201ENST00000305586 GLI3P10071 1580 aa13.74□□□□□ -0.21
FXR1-201ENST00000305586 GLRX3O76003 335 aaKnown RBP13.74□□□□□ -0.21
FXR1-201ENST00000305586 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
FXR1-201ENST00000305586 SASH1O94885 1247 aa13.73□□□□□ -0.21
FXR1-201ENST00000305586 NEK4P51957 841 aa13.73□□□□□ -0.21
FXR1-201ENST00000305586 G3BP1Q13283 466 aaKnown RBP eCLIP13.73□□□□□ -0.215e-6■■□□□ 11.9
FXR1-201ENST00000305586 EPHA10Q5JZY3 1008 aa13.73□□□□□ -0.21
FXR1-201ENST00000305586 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
FXR1-201ENST00000305586 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
FXR1-201ENST00000305586 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
FXR1-201ENST00000305586 TRAK2O60296 914 aa13.73□□□□□ -0.21
FXR1-201ENST00000305586 IFIT2P09913 472 aaKnown RBP13.73□□□□□ -0.21
FXR1-201ENST00000305586 ERVV-2B6SEH9 535 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 SSFA2P28290 1259 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 EVA1CP58658 441 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 AACSQ86V21 672 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 SIL1Q9H173 461 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 ANAPC15P60006 121 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 KLHDC4Q8TBB5 520 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 LAMB4A4D0S4 1761 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 ATP5J2-PTCD1G3V325 749 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 SGSM2O43147 1006 aa13.72□□□□□ -0.21
FXR1-201ENST00000305586 PTCD1O75127 700 aaKnown RBP13.72□□□□□ -0.21
FXR1-201ENST00000305586 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
FXR1-201ENST00000305586 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
FXR1-201ENST00000305586 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
FXR1-201ENST00000305586 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
FXR1-201ENST00000305586 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
FXR1-201ENST00000305586 AFDNP55196 1824 aaKnown RBP13.71□□□□□ -0.21
FXR1-201ENST00000305586 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.21
FXR1-201ENST00000305586 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.22
FXR1-201ENST00000305586 GPATCH3Q96I76 525 aa13.71□□□□□ -0.22
FXR1-201ENST00000305586 ZGPATQ8N5A5 531 aaKnown RBP13.7□□□□□ -0.22
FXR1-201ENST00000305586 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
FXR1-201ENST00000305586 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
FXR1-201ENST00000305586 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
FXR1-201ENST00000305586 UBE3BQ7Z3V4 1068 aa13.7□□□□□ -0.22
FXR1-201ENST00000305586 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
FXR1-201ENST00000305586 GZF1Q9H116 711 aaPredicted RBP13.7□□□□□ -0.22
FXR1-201ENST00000305586 NHSL1Q5SYE7 1610 aa13.7□□□□□ -0.22
FXR1-201ENST00000305586 SHANK3Q9BYB0 1731 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 HSPA4P34932 840 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 ERBB4Q15303 1308 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 A0A087WZG4 1122 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 A1BGP04217 495 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 IL17RAQ96F46 866 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
FXR1-201ENST00000305586 RAD50Q92878 1312 aa13.68□□□□□ -0.22
FXR1-201ENST00000305586 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
FXR1-201ENST00000305586 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
FXR1-201ENST00000305586 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
FXR1-201ENST00000305586 TLR7Q9NYK1 1049 aaKnown RBP13.68□□□□□ -0.22
FXR1-201ENST00000305586 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
FXR1-201ENST00000305586 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
FXR1-201ENST00000305586 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
FXR1-201ENST00000305586 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
FXR1-201ENST00000305586 NUCB2P80303 420 aa13.68□□□□□ -0.22
FXR1-201ENST00000305586 MCM2P49736 904 aa13.67□□□□□ -0.22
FXR1-201ENST00000305586 PKP1Q13835 747 aa13.67□□□□□ -0.22
FXR1-201ENST00000305586 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
FXR1-201ENST00000305586 KIAA1211Q6ZU35 1233 aa13.67□□□□□ -0.22
FXR1-201ENST00000305586 NOL8Q76FK4 1167 aaKnown RBP13.67□□□□□ -0.22
FXR1-201ENST00000305586 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
FXR1-201ENST00000305586 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
FXR1-201ENST00000305586 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
FXR1-201ENST00000305586 CASP7P55210 303 aa13.66□□□□□ -0.22
FXR1-201ENST00000305586 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
FXR1-201ENST00000305586 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
FXR1-201ENST00000305586 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
FXR1-201ENST00000305586 PAPPAQ13219 1627 aa13.66□□□□□ -0.22
FXR1-201ENST00000305586 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
FXR1-201ENST00000305586 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
FXR1-201ENST00000305586 BTG4Q9NY30 223 aa13.66□□□□□ -0.22
FXR1-201ENST00000305586 COL15A1P39059 1388 aa13.66□□□□□ -0.22
FXR1-201ENST00000305586 BOLA2Q9H3K6 86 aa13.65□□□□□ -0.22
FXR1-201ENST00000305586 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
FXR1-201ENST00000305586 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
FXR1-201ENST00000305586 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms