RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 SLC52A2Q9HAB3 445 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 SGSM2O43147 1006 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 ANXA1P04083 346 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
RGPD3-201ENST00000304514 TRHP20396 242 aaPredicted RBP8.79□□□□□ -1
RGPD3-201ENST00000304514 ZNF445P59923 1031 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
RGPD3-201ENST00000304514 SNRKQ9NRH2 765 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 HYPKQ9NX55 129 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 MCM2P49736 904 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 MCTP1Q6DN14 999 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 ECM29Q5VYK3 1845 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 PHKG2P15735 406 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 SNX14Q9Y5W7 946 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 BRD1O95696 1058 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 CHMP4AQ9BY43 222 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 ZBTB7CA1YPR0 619 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 SURF6O75683 361 aaKnown RBP8.79□□□□□ -1
RGPD3-201ENST00000304514 TEFQ10587 303 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 ZSCAN23Q3MJ62 389 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 SUCLG2Q96I99 432 aa8.79□□□□□ -1
RGPD3-201ENST00000304514 PHLPP1O60346 1717 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 TNS2Q63HR2 1409 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 MCCP23508 829 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 RREB1Q92766 1687 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 CWF19L2Q2TBE0 894 aaKnown RBP8.78□□□□□ -1
RGPD3-201ENST00000304514 MYH7P12883 1935 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 NEK4P51957 841 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 CNTROBQ8N137 903 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 C19orf44Q9H6X5 657 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 NPHP3Q7Z494 1330 aa8.78□□□□□ -1
RGPD3-201ENST00000304514 LRP6O75581 1613 aa8.77□□□□□ -1
RGPD3-201ENST00000304514 IGKV5-2P06315 115 aa8.77□□□□□ -1
RGPD3-201ENST00000304514 HSP90AB4PQ58FF6 505 aa8.77□□□□□ -1
RGPD3-201ENST00000304514 BICC1Q9H694 974 aaKnown RBP8.77□□□□□ -1
RGPD3-201ENST00000304514 TMEM94Q12767 1356 aa8.77□□□□□ -1
RGPD3-201ENST00000304514 COL22A1Q8NFW1 1626 aaPredicted RBP8.77□□□□□ -1.01
RGPD3-201ENST00000304514 CICQ96RK0 1608 aaPredicted RBP8.77□□□□□ -1.01
RGPD3-201ENST00000304514 LAMB2P55268 1798 aa8.77□□□□□ -1.01
RGPD3-201ENST00000304514 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
RGPD3-201ENST00000304514 TCHHQ07283 1943 aa8.77□□□□□ -1.01
RGPD3-201ENST00000304514 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1.01
RGPD3-201ENST00000304514 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
RGPD3-201ENST00000304514 DDX21Q9NR30 783 aaKnown RBP eCLIP8.77□□□□□ -1.01
RGPD3-201ENST00000304514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.77□□□□□ -1.01
RGPD3-201ENST00000304514 C4AP0C0L4 1744 aa8.77□□□□□ -1.01
RGPD3-201ENST00000304514 C4BP0C0L5 1744 aa8.77□□□□□ -1.01
RGPD3-201ENST00000304514 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 NSFL1CQ9UNZ2 370 aaKnown RBP8.76□□□□□ -1.01
RGPD3-201ENST00000304514 MYH3P11055 1940 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 SASH1O94885 1247 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 PPP1R9BQ96SB3 815 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 MED23Q9ULK4 1368 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 ERC1Q8IUD2 1116 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 COL16A1Q07092 1604 aaPredicted RBP8.76□□□□□ -1.01
RGPD3-201ENST00000304514 NEURL1BA8MQ27 555 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 GRM8O00222 908 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 CHAMP1Q96JM3 812 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
RGPD3-201ENST00000304514 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 RUFY3Q7L099 469 aa8.76□□□□□ -1.01
RGPD3-201ENST00000304514 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
RGPD3-201ENST00000304514 GOLGA6L22H0YM25 854 aa8.75□□□□□ -1.01
RGPD3-201ENST00000304514 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
RGPD3-201ENST00000304514 LINS1Q8NG48 757 aa8.75□□□□□ -1.01
RGPD3-201ENST00000304514 RFX5P48382 616 aaPredicted RBP8.75□□□□□ -1.01
RGPD3-201ENST00000304514 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
RGPD3-201ENST00000304514 LRP5O75197 1615 aa8.75□□□□□ -1.01
RGPD3-201ENST00000304514 PTH1RQ03431 593 aa8.75□□□□□ -1.01
RGPD3-201ENST00000304514 TMEM87AQ8NBN3 555 aa8.75□□□□□ -1.01
RGPD3-201ENST00000304514 TLR7Q9NYK1 1049 aaKnown RBP8.75□□□□□ -1.01
RGPD3-201ENST00000304514 COL14A1Q05707 1796 aaKnown RBP8.74□□□□□ -1.01
RGPD3-201ENST00000304514 GLRX3O76003 335 aaKnown RBP8.74□□□□□ -1.01
RGPD3-201ENST00000304514 ST3GAL1Q11201 340 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 METTL22Q9BUU2 404 aaPredicted RBP8.74□□□□□ -1.01
RGPD3-201ENST00000304514 RFX7Q2KHR2 1363 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 SPATA31A3Q5VYP0 1347 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 CASP7P55210 303 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 DDX49Q9Y6V7 483 aaKnown RBP8.74□□□□□ -1.01
RGPD3-201ENST00000304514 DOCK2Q92608 1830 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 PRPF40AO75400 957 aaKnown RBP8.74□□□□□ -1.01
RGPD3-201ENST00000304514 EVI5LQ96CN4 794 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 ARXQ96QS3 562 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
RGPD3-201ENST00000304514 SPG7Q9UQ90 795 aa8.74□□□□□ -1.01
RGPD3-201ENST00000304514 CYP27B1O15528 508 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 AK2P54819 239 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 SLC39A6Q13433 755 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 CWC27Q6UX04 472 aaKnown RBP8.73□□□□□ -1.01
RGPD3-201ENST00000304514 ECHDC1Q9NTX5 307 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 CCDC173Q0VFZ6 552 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 GCKRQ14397 625 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 NECTIN1Q15223 517 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 EPHA10Q5JZY3 1008 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 LARGE1O95461 756 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 CLCN1P35523 988 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 NFATC2IPQ8NCF5 419 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 ZSWIM6Q9HCJ5 1215 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms