RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 GPATCH3Q96I76 525 aa29.07■■■□□ 2.24
FOXA3-201ENST00000302177 RBSNQ9H1K0 784 aa29.07■■■□□ 2.24
FOXA3-201ENST00000302177 TMEM63CQ9P1W3 806 aa29.07■■■□□ 2.24
FOXA3-201ENST00000302177 OS9Q13438 667 aaPredicted RBP29.06■■■□□ 2.24
FOXA3-201ENST00000302177 ECHDC1Q9NTX5 307 aa29.06■■■□□ 2.24
FOXA3-201ENST00000302177 ZBTB7CA1YPR0 619 aa29.06■■■□□ 2.24
FOXA3-201ENST00000302177 ADAMTS7Q9UKP4 1686 aa29.05■■■□□ 2.24
FOXA3-201ENST00000302177 PXDNQ92626 1479 aa29.05■■■□□ 2.24
FOXA3-201ENST00000302177 MAP4K4O95819 1239 aaPredicted RBP29.05■■■□□ 2.24
FOXA3-201ENST00000302177 LINS1Q8NG48 757 aa29.05■■■□□ 2.24
FOXA3-201ENST00000302177 ANXA1P04083 346 aa29.04■■■□□ 2.24
FOXA3-201ENST00000302177 ZSCAN30Q86W11 494 aa29.04■■■□□ 2.24
FOXA3-201ENST00000302177 SYAP1Q96A49 352 aaPredicted RBP29.04■■■□□ 2.24
FOXA3-201ENST00000302177 PDLIM2Q96JY6 352 aa29.04■■■□□ 2.24
FOXA3-201ENST00000302177 C19orf44Q9H6X5 657 aa29.04■■■□□ 2.24
FOXA3-201ENST00000302177 DDX58O95786 925 aaKnown RBP29.04■■■□□ 2.24
FOXA3-201ENST00000302177 MST1RQ04912 1400 aa29.04■■■□□ 2.24
FOXA3-201ENST00000302177 RBM27Q9P2N5 1060 aaKnown RBP29.03■■■□□ 2.24
FOXA3-201ENST00000302177 LIMCH1Q9UPQ0 1083 aa29.03■■■□□ 2.24
FOXA3-201ENST00000302177 KCNB2Q92953 911 aa29.02■■■□□ 2.24
FOXA3-201ENST00000302177 DDX21Q9NR30 783 aaKnown RBP eCLIP29.02■■■□□ 2.24
FOXA3-201ENST00000302177 DIAPH3Q9NSV4 1193 aa29.02■■■□□ 2.24
FOXA3-201ENST00000302177 SIPA1L3O60292 1781 aaPredicted RBP29.02■■■□□ 2.24
FOXA3-201ENST00000302177 NOL8Q76FK4 1167 aaKnown RBP29.02■■■□□ 2.24
FOXA3-201ENST00000302177 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.02■■■□□ 2.24
FOXA3-201ENST00000302177 CWC27Q6UX04 472 aaKnown RBP29.01■■■□□ 2.23
FOXA3-201ENST00000302177 EVI5LQ96CN4 794 aa29.01■■■□□ 2.23
FOXA3-201ENST00000302177 ORAI2Q96SN7 254 aa29.01■■■□□ 2.23
FOXA3-201ENST00000302177 TM6SF1Q9BZW5 370 aa29.01■■■□□ 2.23
FOXA3-201ENST00000302177 FOXD4L5Q5VV16 416 aaPredicted RBP29.01■■■□□ 2.23
FOXA3-201ENST00000302177 TMEM87AQ8NBN3 555 aa29.01■■■□□ 2.23
FOXA3-201ENST00000302177 FOXD4L4Q8WXT5 416 aaPredicted RBP29.01■■■□□ 2.23
FOXA3-201ENST00000302177 IFIT2P09913 472 aaKnown RBP29■■■□□ 2.23
FOXA3-201ENST00000302177 NSFL1CQ9UNZ2 370 aaKnown RBP29■■■□□ 2.23
FOXA3-201ENST00000302177 GRM8O00222 908 aa28.99■■■□□ 2.23
FOXA3-201ENST00000302177 PROSER3Q2NL68 480 aa28.99■■■□□ 2.23
FOXA3-201ENST00000302177 RASEFQ8IZ41 740 aa28.99■■■□□ 2.23
FOXA3-201ENST00000302177 HIP1O00291 1037 aa28.99■■■□□ 2.23
FOXA3-201ENST00000302177 KLHL34Q8N239 644 aa28.99■■■□□ 2.23
FOXA3-201ENST00000302177 ATF3P18847 181 aa28.98■■■□□ 2.23
FOXA3-201ENST00000302177 AK2P54819 239 aa28.98■■■□□ 2.23
FOXA3-201ENST00000302177 CHAMP1Q96JM3 812 aa28.98■■■□□ 2.23
FOXA3-201ENST00000302177 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
FOXA3-201ENST00000302177 SYCE3A1L190 88 aa28.97■■■□□ 2.23
FOXA3-201ENST00000302177 PHF14O94880 888 aa28.97■■■□□ 2.23
FOXA3-201ENST00000302177 ZSCAN31Q96LW9 406 aaPredicted RBP28.97■■■□□ 2.23
FOXA3-201ENST00000302177 NAP1L5Q96NT1 182 aaPredicted RBP28.97■■■□□ 2.23
FOXA3-201ENST00000302177 SLAIN2Q9P270 581 aa28.97■■■□□ 2.23
FOXA3-201ENST00000302177 VPS53Q5VIR6 699 aa28.96■■■□□ 2.23
FOXA3-201ENST00000302177 RPAP1Q9BWH6 1393 aaPredicted RBP28.96■■■□□ 2.23
FOXA3-201ENST00000302177 CWF19L2Q2TBE0 894 aaKnown RBP28.95■■■□□ 2.23
FOXA3-201ENST00000302177 RUFY3Q7L099 469 aa28.95■■■□□ 2.23
FOXA3-201ENST00000302177 SNRKQ9NRH2 765 aa28.95■■■□□ 2.23
FOXA3-201ENST00000302177 KRT28Q7Z3Y7 464 aa28.95■■■□□ 2.22
FOXA3-201ENST00000302177 CADPS2Q86UW7 1296 aa28.95■■■□□ 2.22
FOXA3-201ENST00000302177 SPG7Q9UQ90 795 aa28.95■■■□□ 2.22
FOXA3-201ENST00000302177 AXIN2Q9Y2T1 843 aa28.95■■■□□ 2.22
FOXA3-201ENST00000302177 KIF1AQ12756 1690 aa28.94■■■□□ 2.22
FOXA3-201ENST00000302177 ZSCAN22P10073 491 aaPredicted RBP28.94■■■□□ 2.22
FOXA3-201ENST00000302177 G3BP1Q13283 466 aaKnown RBP eCLIP28.94■■■□□ 2.22
FOXA3-201ENST00000302177 PDIA6Q15084 440 aa28.94■■■□□ 2.22
FOXA3-201ENST00000302177 ZSWIM6Q9HCJ5 1215 aa28.94■■■□□ 2.22
FOXA3-201ENST00000302177 ATP6V1DQ9Y5K8 247 aa28.94■■■□□ 2.22
FOXA3-201ENST00000302177 PLEKHG2Q9H7P9 1386 aa28.94■■■□□ 2.22
FOXA3-201ENST00000302177 LARP1Q6PKG0 1096 aaKnown RBP28.93■■■□□ 2.22
FOXA3-201ENST00000302177 KAZALD1Q96I82 304 aa28.93■■■□□ 2.22
FOXA3-201ENST00000302177 SH2B1Q9NRF2 756 aaPredicted RBP28.93■■■□□ 2.22
FOXA3-201ENST00000302177 PDIA4P13667 645 aaKnown RBP28.93■■■□□ 2.22
FOXA3-201ENST00000302177 USP48Q86UV5 1035 aa28.93■■■□□ 2.22
FOXA3-201ENST00000302177 AACSQ86V21 672 aa28.93■■■□□ 2.22
FOXA3-201ENST00000302177 SUCLG2Q96I99 432 aa28.93■■■□□ 2.22
FOXA3-201ENST00000302177 ERBB3P21860 1342 aa28.92■■■□□ 2.22
FOXA3-201ENST00000302177 MSNP26038 577 aaKnown RBP28.92■■■□□ 2.22
FOXA3-201ENST00000302177 NECTIN1Q15223 517 aa28.92■■■□□ 2.22
FOXA3-201ENST00000302177 PA2G4Q9UQ80 394 aaKnown RBP28.92■■■□□ 2.22
FOXA3-201ENST00000302177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.92■■■□□ 2.22
FOXA3-201ENST00000302177 NOL7Q9UMY1 257 aaKnown RBP28.92■■■□□ 2.22
FOXA3-201ENST00000302177 PRAMEF22A3QJZ6 481 aa28.91■■■□□ 2.22
FOXA3-201ENST00000302177 STX6O43752 255 aa28.91■■■□□ 2.22
FOXA3-201ENST00000302177 SASH1O94885 1247 aa28.91■■■□□ 2.22
FOXA3-201ENST00000302177 CASTP20810 708 aaKnown RBP28.91■■■□□ 2.22
FOXA3-201ENST00000302177 TSPY26PQ9H489 355 aa28.91■■■□□ 2.22
FOXA3-201ENST00000302177 SMC3Q9UQE7 1217 aa28.91■■■□□ 2.22
FOXA3-201ENST00000302177 PTH1RQ03431 593 aa28.9■■■□□ 2.22
FOXA3-201ENST00000302177 ZNF790Q6PG37 636 aa28.9■■■□□ 2.22
FOXA3-201ENST00000302177 CYP46A1Q9Y6A2 500 aa28.9■■■□□ 2.22
FOXA3-201ENST00000302177 ZKSCAN1P17029 563 aaPredicted RBP28.9■■■□□ 2.22
FOXA3-201ENST00000302177 XPCQ01831 940 aaPredicted RBP28.9■■■□□ 2.22
FOXA3-201ENST00000302177 BICC1Q9H694 974 aaKnown RBP28.9■■■□□ 2.22
FOXA3-201ENST00000302177 PDRG1Q9NUG6 133 aa28.9■■■□□ 2.22
FOXA3-201ENST00000302177 CCDC171Q6TFL3 1326 aa28.89■■■□□ 2.22
FOXA3-201ENST00000302177 LETM1O95202 739 aaPredicted RBP28.89■■■□□ 2.22
FOXA3-201ENST00000302177 SYT1P21579 422 aa28.89■■■□□ 2.22
FOXA3-201ENST00000302177 MCM5P33992 734 aa28.89■■■□□ 2.22
FOXA3-201ENST00000302177 NEXNQ0ZGT2 675 aa28.89■■■□□ 2.22
FOXA3-201ENST00000302177 LMOD2Q6P5Q4 547 aa28.89■■■□□ 2.22
FOXA3-201ENST00000302177 SLC52A2Q9HAB3 445 aa28.89■■■□□ 2.22
FOXA3-201ENST00000302177 ABCC6O95255 1503 aa28.89■■■□□ 2.21
FOXA3-201ENST00000302177 MAP4K1Q92918 833 aa28.88■■■□□ 2.21
FOXA3-201ENST00000302177 RIC3Q7Z5B4 369 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms