RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CT47B1P0C2W7 299 aaPredicted RBP17.07■□□□□ 0.32
CDT1-201ENST00000301019 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
CDT1-201ENST00000301019 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
CDT1-201ENST00000301019 STK3Q13188 491 aa17.07■□□□□ 0.32
CDT1-201ENST00000301019 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
CDT1-201ENST00000301019 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.07■□□□□ 0.32
CDT1-201ENST00000301019 TNRQ92752 1358 aa17.07■□□□□ 0.32
CDT1-201ENST00000301019 CUL4AQ13619 759 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 TEX2Q8IWB9 1127 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
CDT1-201ENST00000301019 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
CDT1-201ENST00000301019 SLU7O95391 586 aaKnown RBP17.06■□□□□ 0.32
CDT1-201ENST00000301019 PNMA6AP0CW24 399 aaPredicted RBP17.06■□□□□ 0.32
CDT1-201ENST00000301019 PLA2G4AP47712 749 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 BMS1Q14692 1282 aaKnown RBP17.06■□□□□ 0.32
CDT1-201ENST00000301019 ZSCAN26Q16670 478 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 DDX11Q96FC9 970 aa17.06■□□□□ 0.32
CDT1-201ENST00000301019 MYO5BQ9ULV0 1848 aa17.05■□□□□ 0.32
CDT1-201ENST00000301019 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
CDT1-201ENST00000301019 FHOD1Q9Y613 1164 aa17.05■□□□□ 0.32
CDT1-201ENST00000301019 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
CDT1-201ENST00000301019 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
CDT1-201ENST00000301019 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
CDT1-201ENST00000301019 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
CDT1-201ENST00000301019 GOLGA6L19H0YKK7 550 aa17.04■□□□□ 0.32
CDT1-201ENST00000301019 TPM3P06753 285 aa17.04■□□□□ 0.32
CDT1-201ENST00000301019 IBSPP21815 317 aaPredicted RBP17.04■□□□□ 0.32
CDT1-201ENST00000301019 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
CDT1-201ENST00000301019 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
CDT1-201ENST00000301019 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
CDT1-201ENST00000301019 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
CDT1-201ENST00000301019 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
CDT1-201ENST00000301019 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
CDT1-201ENST00000301019 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
CDT1-201ENST00000301019 RAD50Q92878 1312 aa17.03■□□□□ 0.32
CDT1-201ENST00000301019 TEX35Q5T0J7 233 aa17.03■□□□□ 0.32
CDT1-201ENST00000301019 TTLL5Q6EMB2 1281 aa17.03■□□□□ 0.32
CDT1-201ENST00000301019 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
CDT1-201ENST00000301019 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.32
CDT1-201ENST00000301019 FOXR1Q6PIV2 292 aa17.02■□□□□ 0.32
CDT1-201ENST00000301019 BECN2A8MW95 431 aa17.02■□□□□ 0.32
CDT1-201ENST00000301019 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.32
CDT1-201ENST00000301019 NR1I2O75469 434 aa17.02■□□□□ 0.32
CDT1-201ENST00000301019 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
CDT1-201ENST00000301019 PHACTR2O75167 634 aa17.02■□□□□ 0.31
CDT1-201ENST00000301019 ISM2Q6H9L7 571 aa17.02■□□□□ 0.31
CDT1-201ENST00000301019 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.31
CDT1-201ENST00000301019 RUFY3Q7L099 469 aa17.02■□□□□ 0.31
CDT1-201ENST00000301019 ERO1AQ96HE7 468 aa17.02■□□□□ 0.31
CDT1-201ENST00000301019 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 ERBB3P21860 1342 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
CDT1-201ENST00000301019 CHMLP26374 656 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 DNAI1Q9UI46 699 aa17.01■□□□□ 0.31
CDT1-201ENST00000301019 URI1O94763 535 aaPredicted RBP17■□□□□ 0.31
CDT1-201ENST00000301019 MCM2P49736 904 aa17■□□□□ 0.31
CDT1-201ENST00000301019 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
CDT1-201ENST00000301019 SNW1Q13573 536 aaKnown RBP17■□□□□ 0.31
CDT1-201ENST00000301019 LARP1BQ659C4 914 aaKnown RBP17■□□□□ 0.31
CDT1-201ENST00000301019 FAM212AQ96EL1 285 aa17■□□□□ 0.31
CDT1-201ENST00000301019 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
CDT1-201ENST00000301019 UBXN4Q92575 508 aa17■□□□□ 0.31
CDT1-201ENST00000301019 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
CDT1-201ENST00000301019 SRRTQ9BXP5 876 aaKnown RBP17■□□□□ 0.31
CDT1-201ENST00000301019 C11orf57Q6ZUT1 292 aaPredicted RBP16.99■□□□□ 0.31
CDT1-201ENST00000301019 API5Q9BZZ5 524 aaKnown RBP16.99■□□□□ 0.31
CDT1-201ENST00000301019 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
CDT1-201ENST00000301019 SLC20A2Q08357 652 aa16.99■□□□□ 0.31
CDT1-201ENST00000301019 MNS1Q8NEH6 495 aa16.99■□□□□ 0.31
CDT1-201ENST00000301019 RABEP2Q9H5N1 569 aa16.99■□□□□ 0.31
CDT1-201ENST00000301019 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
CDT1-201ENST00000301019 C3P01024 1663 aa16.99■□□□□ 0.31
CDT1-201ENST00000301019 MTMR6Q9Y217 621 aa16.98■□□□□ 0.31
CDT1-201ENST00000301019 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
CDT1-201ENST00000301019 NOP2P46087 812 aaKnown RBP16.98■□□□□ 0.31
CDT1-201ENST00000301019 MSH6P52701 1360 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 CASQ1P31415 396 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 SPATA32Q96LK8 384 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
CDT1-201ENST00000301019 CARD6Q9BX69 1037 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 SASH3O75995 380 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 FTOQ9C0B1 505 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDT1-201ENST00000301019 RRP15Q9Y3B9 282 aaKnown RBP16.97■□□□□ 0.31
CDT1-201ENST00000301019 ABCC4O15439 1325 aa16.97■□□□□ 0.31
CDT1-201ENST00000301019 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
CDT1-201ENST00000301019 SMC2O95347 1197 aa16.96■□□□□ 0.31
CDT1-201ENST00000301019 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
CDT1-201ENST00000301019 MCM6Q14566 821 aa16.96■□□□□ 0.31
CDT1-201ENST00000301019 HSP90AA4PQ58FG1 418 aa16.96■□□□□ 0.31
CDT1-201ENST00000301019 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
CDT1-201ENST00000301019 WWC2Q6AWC2 1192 aa16.96■□□□□ 0.31
CDT1-201ENST00000301019 KCNG1Q9UIX4 513 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms