RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 ZNF397Q8NF99 534 aaPredicted RBP13.22□□□□□ -0.29
EPB42-201ENST00000300215 ABCC10Q5T3U5 1492 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 ZNF165P49910 485 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
EPB42-201ENST00000300215 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 STARD3NLO95772 234 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 JAKMIP3Q5VZ66 844 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 ISM2Q6H9L7 571 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
EPB42-201ENST00000300215 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.29
EPB42-201ENST00000300215 USP8P40818 1118 aa13.21□□□□□ -0.3
EPB42-201ENST00000300215 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.3
EPB42-201ENST00000300215 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.3
EPB42-201ENST00000300215 CNNM3Q8NE01 707 aa13.21□□□□□ -0.3
EPB42-201ENST00000300215 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.3
EPB42-201ENST00000300215 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 TRMT1LQ7Z2T5 733 aaKnown RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 LUZP1Q86V48 1076 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 DYDC1Q8WWB3 177 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 A0A087WZG4 1122 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 ZNF213O14771 459 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 HCLS1P14317 486 aaPredicted RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 AKAP2Q9Y2D5 859 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
EPB42-201ENST00000300215 ZSWIM4Q9H7M6 989 aa13.2□□□□□ -0.3
EPB42-201ENST00000300215 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 MBD5Q9P267 1494 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 IFIT3O14879 490 aaKnown RBP13.19□□□□□ -0.3
EPB42-201ENST00000300215 FLIIQ13045 1269 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
EPB42-201ENST00000300215 ACEP12821 1306 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
EPB42-201ENST00000300215 HAND2P61296 217 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 STX6O43752 255 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 ADCY5O95622 1261 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 IDEP14735 1019 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 FKBP15Q5T1M5 1219 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
EPB42-201ENST00000300215 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
EPB42-201ENST00000300215 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
EPB42-201ENST00000300215 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 IGHDP01880 384 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 ANXA1P04083 346 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 CCDC144CPQ8IYA2 1237 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
EPB42-201ENST00000300215 GOLGA6L10A0A0M3HER8 536 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 TMC6Q7Z403 805 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 GJB2P29033 226 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
EPB42-201ENST00000300215 TNNQ9UQP3 1299 aa13.18□□□□□ -0.3
EPB42-201ENST00000300215 GPTP24298 496 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 BMP2KLQ5H9B9 411 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 GOLIM4O00461 696 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 CCDC194A0A1B0GVG4 234 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 CASQ1P31415 396 aa13.17□□□□□ -0.3
EPB42-201ENST00000300215 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
EPB42-201ENST00000300215 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
EPB42-201ENST00000300215 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 SHTN1A0MZ66 631 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
EPB42-201ENST00000300215 GIMAP6Q6P9H5 292 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 TNRQ92752 1358 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
EPB42-201ENST00000300215 CETN2P41208 172 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 CTAGE5O15320 804 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
EPB42-201ENST00000300215 MAP2K1Q02750 393 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms